Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0901 ATGTTTTCCGGCGACGGCTCCTCCATGGATCCGATGTTTTCCGGCGTGAGCCTGCAGTCACTCCTCTCTCTGAACCCTTCAGTCTTCGAGGACGGGTTCCCCACCTTGTCCTCCCTAACCGACGACCCTAACCTGATTAATATTCCCCAATCCTCAGAACCCGGCACCACACTGAACCTCCTCATTCCCAAAACCGAACCACAGCAGCCCTTCAACTTCTTCCAGCGCCTCCCCGAGCTCCGCTCGAAGGAGCAGCCGGAGGCGAAGCGGCAGCGCGTGAATTCATCTTCCCCGGCGATCCCGCAGAGCAACCTGGCACGGCAGCGGCGTCAGAAGCTGAGCGAGAAAACGCGGTGTCTCCAGAAGCTGATGCCATGGGACAAGAAAATGGACCAGGGGACCCTTCTGGAAGAATCTTACAAGTACGTGAAGTTCCTGCAGGCCCAACTCCGCGTCCTCGACTCCATGCCCTCTTACTCTCACCCATCCTGCCTCTCCCTCGAAAACGGCGGCGTTTTCGGCGACCTCGATAAGCTGAACCGCAGCCAGGTCCTCCAGGTGCTGGTTAACTCCCCCGTCGCCCAAACCATGCTCTACTCCCAAGGCTTCTGCGTTTTCTCCCTCGAACAGTTGTCTCTTCTCAGGAAACTCTCTCAGGCAAGGCTACAACACGTGGCATCGGATCCTCCTTACTCCAACACTTTCTTCACCACCGCCGCCCCTTCATTTCCCTAA 735 0.5755 MFSGDGSSMDPMFSGVSLQSLLSLNPSVFEDGFPTLSSLTDDPNLINIPQSSEPGTTLNLLIPKTEPQQPFNFFQRLPELRSKEQPEAKRQRVNSSSPAIPQSNLARQRRQKLSEKTRCLQKLMPWDKKMDQGTLLEESYKYVKFLQAQLRVLDSMPSYSHPSCLSLENGGVFGDLDKLNRSQVLQVLVNSPVAQTMLYSQGFCVFSLEQLSLLRKLSQARLQHVASDPPYSNTFFTTAAPSFP 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0901 244 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 5 223 IPR045843 GO:0003700|GO:0006355
Aed1g0901 244 SMART finulus 103 152 IPR011598 GO:0046983
Aed1g0901 244 Gene3D - 102 158 IPR036638 GO:0046983
Aed1g0901 244 MobiDBLite consensus disorder prediction 91 108 - -
Aed1g0901 244 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 97 146 IPR011598 GO:0046983
Aed1g0901 244 PANTHER TRANSCRIPTION FACTOR BHLH117 5 223 - -
Aed1g0901 244 MobiDBLite consensus disorder prediction 83 111 - -
Aed1g0901 244 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 107 165 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0901 Aed-Chr1 9499452 9500186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0901 86 219 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G22100 42.361 2.01e-26 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0901 - - gmx:102666676 310.071