Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0877 ATGGATTTTGACCTGGAAAACCCTCTTGGAAACTTCCACGACCTTCCCTGCGATGCTGTCCCTTCGCTCTTCCTCATTGAATCTGACCACATCCCTCCACCGAAATACTGTCAGGGTCTCAAAGCCAGCGACTTCGACATCTCTGTTAGAAGAGACGTTGTCTCTTTGATCTCGCAGTTGTCCTGCACCTTCGATCCAGTTTTGCCTTACTTAGCTATCAACTACTTGGATCGCTTCCTCGCTCACCAAGGAATATTGCAACCAAAGCCATGGGCAAACAAGCTCCTTGCAGTGTCTTGTTTTTCTCTAGCTGCCAAGATGTTGAAAACAGAGTACTCTGCCACTGATGTCCAGGTTCTTCTGAATCATGCTGATGGCGGTGCCATTTTTGAGGCTCAAACAGTTCAAAGAATGGAAGGCATTGTCTTGGGGGCTCTCCAGTGGCGAATGCGTTCGATCACCCCTTTCTCTTTCATTCACTTTTTCGTCAATTTGTTCAGGCTCAAAGACCTGGCATTGAGGCAGGTTCTGAAAGATCGAGCATCAGAAATCATACTCAAGTCACAAACAGAGATAAAGGTCTTGGAATTCAAGCCATCTACAGTTGCTGCGTCAGCCCTTCTGTATGCTTCACATGAGTTGTTTCCCTTTCAATATCCGTGCTTCTTAAGAGCGATATCCGATTGTTCTTATATTAATAAGGAAACTGTGGTGCAATGTTATAATGTGATACAAGACATAGCCAGGGAGGAGTACGAATCAGTTTTAAACATAAATTCAACTTCAGACACGCCGGCTAATGTGTTAGACGAACATTTTCTGAGTTTGGAAAGTGAAAAAACCAATGGAACCAACGTTGTGATACAAGAGCAGGACTTCAAAAGAAGAAAAATCACCGATTATGGCAACAAGCGCACGGTCCCGTTTTCACATTTTCATCAATGCTGA 948 0.442 MDFDLENPLGNFHDLPCDAVPSLFLIESDHIPPPKYCQGLKASDFDISVRRDVVSLISQLSCTFDPVLPYLAINYLDRFLAHQGILQPKPWANKLLAVSCFSLAAKMLKTEYSATDVQVLLNHADGGAIFEAQTVQRMEGIVLGALQWRMRSITPFSFIHFFVNLFRLKDLALRQVLKDRASEIILKSQTEIKVLEFKPSTVAASALLYASHELFPFQYPCFLRAISDCSYINKETVVQCYNVIQDIAREEYESVLNINSTSDTPANVLDEHFLSLESEKTNGTNVVIQEQDFKRRKITDYGNKRTVPFSHFHQC 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0877 315 SMART Cyclin_C_2 153 268 IPR004367 -
Aed1g0877 315 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 5 302 - -
Aed1g0877 315 Pfam Cyclin, N-terminal domain 28 150 IPR006671 -
Aed1g0877 315 SUPERFAMILY Cyclin-like 13 150 IPR036915 -
Aed1g0877 315 Gene3D - 23 242 - -
Aed1g0877 315 CDD CYCLIN 50 143 IPR013763 -
Aed1g0877 315 Gene3D - 33 151 - -
Aed1g0877 315 CDD CYCLIN 153 244 IPR013763 -
Aed1g0877 315 SMART cyclin_7 51 144 IPR013763 -
Aed1g0877 315 SMART cyclin_7 160 246 IPR013763 -
Aed1g0877 315 PANTHER CYCLINS 5 302 IPR039361 -
Aed1g0877 315 SUPERFAMILY Cyclin-like 134 249 IPR036915 -
Aed1g0877 315 Pfam Cyclin, C-terminal domain 153 252 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0877 Aed-Chr1 9318986 9321675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0877 1 299 Core Cell Cycle Gene Families AT4G03270 44.089 8.20e-78 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0877 K18812 - gmx:100811659 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0877 1 9318986 9321675 Aed1g0877 1 9318986 9321675 ECH
Aed1g0877 1 9318986 9321675 Aed5g0796 5 6019869 6021554 PCT