Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0848 ACTAGGGTTTTTAGTGTCCGTCTTCTCTGCGAGATAGAACTAGAAGCGAAAGCAGCGGCTACCCTTACCTCTCTGTCCTTCGTCTCTACCAATTTGAGGTGCATACATTCACTGTCATCTCAGTTTTTCATCGAAAGCCTTGTTCTTTCTGCCACTCTTCGTTCTTCTGCATTTGTTCTGTTCTCGCTTTCTCTAATTGTATTTGTTTATGCAGCCATGGCCGACGAGGTGAATCACGAATCAGCAGTTGTTACAGATCCCTCCCAGATCGATGTCAAGCTCTTTAACCGCTGGACCTTCGAGGACATTGAGATGACTGACATGTCTCTGGGTGATTACATTGGAGTGGCTGCTTCGAAGCACGCGACCTATGTGCCTCACACCGCTGGTAGGTACTCGATGAAGCGTTTCAGGAAGGCGCAGTGCCCCATTGTTGAGAGGCTTACGAACTCTCTTATGATGCACGGTAGAAACAATGGCAAGAAACTCATGGCTGTTAGGATCATCAAGCATGCTATGGAGATTATTCACTTGTTGACTGACCTGAACCCCATTCAGGTTATTGTTGATGCTGTCATCAACAGTGTGGGTACTGAAGCTCTTAACAGTGAATGCTGTGGACCCCGTGAAGATGCAACAAGAATTGGTTCAGCTGGAGTTGTTAGGAGACAGGCTGTGGATATCTCACCCCTTCGTCGTGTTAATCAGGCAATCTATCTTCTAACGACTGGAGCACGTGAAGCTGCTTTCAGAAACATTAAGACAATTGCTGAATGCTTGGCCGATGAACTTATCAATGCAGCAAAAGGGTCATCCAACAGCTATGCCATCAAGAAAAAGGATGAAATTGAGAGAGTTGCCAAGGCCAATCGTTGA 876 0.4623 TRVFSVRLLCEIELEAKAAATLTSLSFVSTNLRCIHSLSSQFFIESLVLSATLRSSAFVLFSLSLIVFVYAAMADEVNHESAVVTDPSQIDVKLFNRWTFEDIEMTDMSLGDYIGVAASKHATYVPHTAGRYSMKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVINSVGTEALNSECCGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0848 291 Gene3D Ribosomal protein S7 domain 74 291 IPR036823 -
Aed1g0848 291 PANTHER RIBOSOMAL PROTEIN S7 78 291 IPR000235 GO:0006412
Aed1g0848 291 PANTHER 40S RIBOSOMAL PROTEIN S5 78 291 - -
Aed1g0848 291 ProSitePatterns Ribosomal protein S7 signature. 146 172 IPR020606 GO:0003723|GO:0003735|GO:0006412
Aed1g0848 291 Pfam Ribosomal protein S7p/S5e 136 291 IPR023798 -
Aed1g0848 291 SUPERFAMILY Ribosomal protein S7 93 291 IPR036823 -
Aed1g0848 291 TIGRFAM uS7_euk_arch: ribosomal protein uS7 92 291 IPR005716 GO:0003735|GO:0006412|GO:0015935
Aed1g0848 291 CDD uS7_Eukaryote 93 291 IPR005716 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0848 Aed-Chr1 9171395 9173566 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0848 91 291 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 85.572 8.11e-129 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0848 K02989 - gmx:100815850 366.311