Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0845 ATGGGCAGCATGTCATGGTGGAGTAACCGTAGGCGTCCACATCGCATTACTTCCCAAGCTTGTTCAGTTTCTCTCTTAGGCAAGTTCGTTCTGTTTCTCATGTCCATTGAAAAGAAGGAGTGGCTGAAGATTAACTTTGAGCTTGGAAAAATGGATGAGGAGAGATCTGGTTCACAGTACAAGAGAGTGAAGATCCATGGAGAAGGAGAAGTTCAATTGGGATTTATAATTATGCTGATCTGCAGAGTCCATTTTGTAATTGGAGCAGTCAATGCAATTAATGGCTTATATGTTGCATTGGGCAACCCCGTTCTTCCTGGGTGGGTTTCTAGTGGGGGAGACCCGTGCGGACAAGGGTGGCAAGGTGTTCAGTGTAATGGTTCAATCATACAAGAAATAATTCTGAATGGTGCAAACTTGGGAGGAGAACTGGGTGATAGCTTAGGAAGTTTTGTTTCTATCAGAGCAATAGTTCTAAACAACAATCACATTGGAGGAAGTATTCCATCCAGTTTGCCAATAACTTTACAGCACTTCTTTCTTTCAGATAATCAGTTCACTGGAAGTATTCCAGCCTCTTTATCCACATTGACTGAACTGTCTGACATGTCTCTTAACGCCAATCTTTTAACAGGAGAAATACCAGATGCATTCTTGTCTCTTACACAATTGATCAATCTAGATTTATCTAATAATAATTTGAGTGGGGAATTGCCTTCATCTATGGAGACTTTGTCTGCCCTGACCAGCGTACATTTTCAGAACAATAACCTGTCTGGGACCCTGGATGTTTTACAAGACCTTCCACTGCAAGATTTGAATGTTGAGAACAACCAGTTTGCTGGACCAATACCTCCAAAGTTGTTAAGCATCCCTAGCTTCAGAAAAGATGGAAACCCGTTTAATGTTATTGACAATGCTACTACTATAGCCCCAGCACGACCACCTCGATCTCCAGTGACAGCATCACCATTAGGAACTGTTGTTTCTGTGACACCATCATCGTCTGGACGTATACCTACTAAACCGACCGAGGGACCAACTGCATCAAAGGAATCAAATTCTGAGAAATCGAAAACACACACCAAAAGTGTGGTTTGGATATCTATTTCTGCTATACTGGTGTTTGTTATTCTAGTTCTGGGACTTCTTCTCTTCGTTCCAAGATGTAGCAGCAGAAGAGAATCGGTTAACAGAAGTTCCAAGCAACATCAAGTTGGAGCGTATGGAGGTGAAAGACAGAATCATAGGGACTATGGGGCTTTTGTCCAACTCCAACCACCTATGCCCAAAGGTGCTGATGTGAGGCCCAAAGGGGATCATCAAGAAGAGGCAAGGAGAGTGAGGGCTATTCCAAAGCCACAAGGGGAGCAAGAGAAGGATGAACAAAGAATAGGAACAATCCCAAAGCTGTTAGAGCATGAGATAGATATGAGTTCACTAGATTATTCAATGCCTTCTCCACCGCCACCTCCTCTACCTCCACCACTACCTGTTGAGAGGGTGATTGTTGAACCAACCTCATTCCACAAAGAGGCTAACATGAATCCTCCCAAAAAAAGTCAGGTTCCTCCAACTTTTGCAAAAACTTTCACCATTGCATGCCTTCAACAGTATACAAATAGCTTTTCTCAAGACAATCTTATGGGCTTAGGCATGCTGGGGAGTGTGTATAGGGCAGAGCTTCCTGATGGAAAGATACTTGCTGTGAAGAAACTAGACAAGAGAGTTTCTGATCACCAAACAGATGATGAGTTTCTTGAATTGATAAACAGTGTTGACCGAATCCGGCATCCAAATATTGTTGAGCTTATTGGGTACTGTGCAGAACATGGTCAAAGGCTTCTGATTTATGAGTATTGCAGTAATGGGTCTCTGCAGGATGCAATCCATGCAGATGATGAATTTAAAACAAGACTGTCATGGAATCCTCGCATTCGGATAGCACTCGGGGCAGCTAGAGCCTTAGAGTACTTGCATGAGCAGTGTCAGCAACCTGTTGTACACAGAAATTTCAAGTCTGCTAACATTCTCCTCGGTGATGATGTTTCTGTGCGTGTATCTGATTGTGGTTTGGCTCCACTAATAACTAAAGGTTCTGTAAGTCAGCTCTCAGGACAACTGCTAACAGCATATGGCTATGGAGCTCCAGAGTTTGAGTCAGGAATTTACACATACCAGAGTGATGTTTACAGCTTTGGAGTAGTTATGTTAGAAATTTTGACAGGCCGTAAGTCCTATGACAGGACGCGCCCTCGAGGGGAACAGTTTCTGGTGAGGTGGGCTATTCCTCAGCTTCATGACATTGATGCATTATCAAAGATGGTTGATCCTTTTCTAAAAGGAAACTACCCTGCCAAATCATTGTCAAATTTTGCAGACATTATTTCTAGATGTGTTCAGTCAGAGCCAGAATTTAGGCCAGCAATGTCAGAGGTGGTCTCGGACTTAATAAATATGATAAGTAAGGAATCTTAG 2478 0.4278 MGSMSWWSNRRRPHRITSQACSVSLLGKFVLFLMSIEKKEWLKINFELGKMDEERSGSQYKRVKIHGEGEVQLGFIIMLICRVHFVIGAVNAINGLYVALGNPVLPGWVSSGGDPCGQGWQGVQCNGSIIQEIILNGANLGGELGDSLGSFVSIRAIVLNNNHIGGSIPSSLPITLQHFFLSDNQFTGSIPASLSTLTELSDMSLNANLLTGEIPDAFLSLTQLINLDLSNNNLSGELPSSMETLSALTSVHFQNNNLSGTLDVLQDLPLQDLNVENNQFAGPIPPKLLSIPSFRKDGNPFNVIDNATTIAPARPPRSPVTASPLGTVVSVTPSSSGRIPTKPTEGPTASKESNSEKSKTHTKSVVWISISAILVFVILVLGLLLFVPRCSSRRESVNRSSKQHQVGAYGGERQNHRDYGAFVQLQPPMPKGADVRPKGDHQEEARRVRAIPKPQGEQEKDEQRIGTIPKLLEHEIDMSSLDYSMPSPPPPPLPPPLPVERVIVEPTSFHKEANMNPPKKSQVPPTFAKTFTIACLQQYTNSFSQDNLMGLGMLGSVYRAELPDGKILAVKKLDKRVSDHQTDDEFLELINSVDRIRHPNIVELIGYCAEHGQRLLIYEYCSNGSLQDAIHADDEFKTRLSWNPRIRIALGAARALEYLHEQCQQPVVHRNFKSANILLGDDVSVRVSDCGLAPLITKGSVSQLSGQLLTAYGYGAPEFESGIYTYQSDVYSFGVVMLEILTGRKSYDRTRPRGEQFLVRWAIPQLHDIDALSKMVDPFLKGNYPAKSLSNFADIISRCVQSEPEFRPAMSEVVSDLINMISKES 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0845 825 SUPERFAMILY L domain-like 113 293 - -
Aed1g0845 825 ProSiteProfiles Protein kinase domain profile. 543 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g0845 825 PANTHER OS01G0253100 PROTEIN 80 824 IPR045271 GO:0004714|GO:0006468
Aed1g0845 825 Pfam Protein tyrosine and serine/threonine kinase 546 817 IPR001245 GO:0004672|GO:0006468
Aed1g0845 825 MobiDBLite consensus disorder prediction 434 463 - -
Aed1g0845 825 MobiDBLite consensus disorder prediction 309 361 - -
Aed1g0845 825 MobiDBLite consensus disorder prediction 394 413 - -
Aed1g0845 825 MobiDBLite consensus disorder prediction 323 351 - -
Aed1g0845 825 Gene3D Ribonuclease Inhibitor 94 309 IPR032675 -
Aed1g0845 825 SUPERFAMILY Protein kinase-like (PK-like) 518 817 IPR011009 -
Aed1g0845 825 MobiDBLite consensus disorder prediction 425 463 - -
Aed1g0845 825 Gene3D Transferase(Phosphotransferase) domain 1 621 825 - -
Aed1g0845 825 Gene3D Phosphorylase Kinase; domain 1 506 620 - -
Aed1g0845 825 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 80 824 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0845 Aed-Chr1 9158192 9164175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0845 90 824 Strubbelig Receptor Gene Family AT4G03390 62.264 0.0 853
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Aed1g0845 PK_Tyr_Ser-Thr 3.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0845 - - gmx:100811490 1254.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0845 1 9158192 9164175 Aed1g0845 1 9158192 9164175 ECH
Aed1g0845 1 9158192 9164175 Aed5g0819 5 6168569 6176225 PCT