Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0832 ATGGCTGCAGCGAACAGTGGCAAATTCGACGTGGGAGATGAAACTCACAAAACTTCCCGAAAGAGTAGTGAAAGCCAAGATTGGGAGATTGAGAAGGGAAAGGGAGTGGATTCAAGCTTTTCTCAGAGGCGTCAATGGAAGCCAGTTTTTGATGACGCTTCTATCTCACACAATAGACCTCTGAAGAAAATCTGCAGCCCCGATCGCCAAAATACAAACCAATCTTCTTCAACTACTCCTTTTCAACCTTCTCCACTCTCTAACCCACCTTCAAGAATAGTGTTCCCTTTTGCCTACGACGGTTCCCATTCCCAACAACACCCCATGCAACTCCCTCACCAATTTGGAACCACAAATTCACCATTCCCTCACCCATCTCTCCAAAGCCAGCAGCACCAGATGATATCATTCGGGTCCTCCCAACAACATAATCTCGCATATCCACCAATCATAGCCCGAGACTCTTCTCTTCTAAATCAACATCAACATCAGTATCAGTATCAGCATCAGCATCAACATCAGCAGCAACTGCTTCAGTATTGGAGTGACGCGTTGAATCTAAGTCCAAGAGGAATGTTGAGCCGTTTGGGGCCAGATGGAAGGCCATTGTATAGGCCTCCAACGCAGCCCATAAACACAACGAAACTCTACAGAGGAGTGAGGCAACGTCATTGGGGAAAATGGGTCGCTGAAATCCGTCTCCCTCGGAACAGAACGCGTCTCTGGTTAGGCACATTTGACACGGCCGAAGACGCCGCCATGGCCTACGACCGCGAAGCCTTCAAGCTCCGAGGAGAGAATGCCAGACTCAATTTCCCCGAACTGTTCCTCAATAAAAAAGAACAACAAGAAGAAAAAGAACAAGAAGCCTCTTCGCCAGTGCTTGCAGCTATTGAAAAGCAGCATGAACATGAACACCGTGACGTGCCAAGAGAAGAGTCTAATGAGAATGACTCTGGAATTGGTTCCAGTGACGCCACGGTGAGCGACGAGGTTCATGCTTCTGCTTCTGCTTTTGCTGCGAGTTCTGAAGGAGTTTCGCAGGAACTGGTTTGGGGAGAAATGTCTGCATGGTTCAATGCTATTCCTGCTGCTTGGGGTCCTGGTAGTCCCATGTGGGATGATTTGGATGCCACCAATAACCTTCTTTGTCAATCACACAATCCTTTTGCAAATCCCAATCAACAAGGCCTCAATGATGCTACTAATGATTCTCAGAGACAAGAACAAAACACTGAACCTTACTTGTGGAAGGACCAGGATTGA 1266 0.4747 MAAANSGKFDVGDETHKTSRKSSESQDWEIEKGKGVDSSFSQRRQWKPVFDDASISHNRPLKKICSPDRQNTNQSSSTTPFQPSPLSNPPSRIVFPFAYDGSHSQQHPMQLPHQFGTTNSPFPHPSLQSQQHQMISFGSSQQHNLAYPPIIARDSSLLNQHQHQYQYQHQHQHQQQLLQYWSDALNLSPRGMLSRLGPDGRPLYRPPTQPINTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENARLNFPELFLNKKEQQEEKEQEASSPVLAAIEKQHEHEHRDVPREESNENDSGIGSSDATVSDEVHASASAFAASSEGVSQELVWGEMSAWFNAIPAAWGPGSPMWDDLDATNNLLCQSHNPFANPNQQGLNDATNDSQRQEQNTEPYLWKDQD 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0832 421 Gene3D AP2/ERF domain 216 274 IPR036955 GO:0003700|GO:0006355
Aed1g0832 421 MobiDBLite consensus disorder prediction 384 421 - -
Aed1g0832 421 MobiDBLite consensus disorder prediction 301 329 - -
Aed1g0832 421 Pfam AP2 domain 217 265 IPR001471 GO:0003700|GO:0006355
Aed1g0832 421 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF053 1 402 - -
Aed1g0832 421 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 402 - -
Aed1g0832 421 CDD AP2 215 275 IPR001471 GO:0003700|GO:0006355
Aed1g0832 421 ProSiteProfiles AP2/ERF domain profile. 216 273 IPR001471 GO:0003700|GO:0006355
Aed1g0832 421 MobiDBLite consensus disorder prediction 65 82 - -
Aed1g0832 421 MobiDBLite consensus disorder prediction 1 92 - -
Aed1g0832 421 SMART rav1_2 216 279 IPR001471 GO:0003700|GO:0006355
Aed1g0832 421 PRINTS Ethylene responsive element binding protein signature 217 228 IPR001471 GO:0003700|GO:0006355
Aed1g0832 421 PRINTS Ethylene responsive element binding protein signature 239 255 IPR001471 GO:0003700|GO:0006355
Aed1g0832 421 MobiDBLite consensus disorder prediction 10 38 - -
Aed1g0832 421 MobiDBLite consensus disorder prediction 301 315 - -
Aed1g0832 421 MobiDBLite consensus disorder prediction 384 413 - -
Aed1g0832 421 SUPERFAMILY DNA-binding domain 216 274 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0832 Aed-Chr1 9071041 9072306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0832 181 381 AP2-EREBP Transcription Factor Family AT2G20880 55.093 9.45e-61 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed1g0832 AP2 2.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0832 - - gmx:100101898 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0832 1 9071041 9072306 Aed1g0832 1 9071041 9072306 ECH