Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0819 ATGGCGTCTTTACCTTCGGGTCTCAGCAACGGTGCTTCCAAGGGCTTCGATTTTGGTTCCGACGACATCCTCAGTTCATTCGAGGAGGACAACACCAACCACGATTCTTCCAACATCGATCCCACCAAGGGTTCTCATGCATCAAGGATGGCAAGATCATCAATAGTTCCTGCTACTGCCTATAGTTCGTCTGACGATTCTTTGAGCCAAGATGTGATTGCAACTGTTGAGAAGAGTATGAAAACACATACTGACAACCTTATGCGGTTTCTTGAGGGACTTAGTTCAAGGCTGTCACAGTTGGAATTATATTGTTACAATCTTGACAAATCAATTGGAGCAATGCGGTCTGATTTAAATAGTGACCATGAGGAGGCAGATTCAAGACTCAAATCTCTTGATAAACACCTTCATGAAGTACACAGGTCTATGCTAATTTTGAGAGACAAGCAAGAGCTAGCTGAGACTCGGAAAGAATTAGCCAAGCTTAAACATGTTCAGAAAGAATCATCTTCCTCAAGCCATTCGCAGTCAAATGAGGAGAGATCTTCACCTTCTTCCATGGATCCCAAAAGAATTGATAATGTATCTGACACACACAACCAAGAGCTAGCTCTTGCCTTACCTCATCAAGTTGCTCCCCGGCAACAGCTTGTGGCATCCTCCTATCAAGTGCCAGCTCCAAATGTGAGCCAAACCACCCAACAACCTCATTATTACTTGATGCCTACCCCTTTACCCAATCCACAAGCTGTGCCCAAGCTTCCCCAGAATCAGTATTTACCTTCTGATCCACACTATCGAATTTCACAAGCAACATCATCATCATCTCAGGTAATACAATCCCCACCGGTGCAACAATTTTCTCAGTATCTTCAGCAGCTACAGCACCAACAACAGCAATGGCCTCAACAGTTACCACAGCAGGTGCAACCTCCACAACCACCCACCTCAATGCAGTCTCCAATAAGACCCCTCTTGACAAATGCTTCCACTCCATATCCTACAAGCCAAACTACAAATCCTCTTCCAACAGAAACACTGCCAAACAGCATGCCAATGCAATTGCCTTATTCTGGGATTCCACCCCGAGGATCTAGCCGTGGTGGTGGTGATGCCATGCCATACCCTACTAGTCAAGCTACAAATCCTCTTCCCCCAGAAACCCTGCCAAACAGCATGCCAATGCAAATGCCTTATTCAGGGATTCCAACCCGAGGAACTAGCCAGGGCGATGCCATGCCTTATGGATATGGTGGAGTTGGTAGAACAGTTCCACAGCAACCTCAGCCCCAGCACATGAAGGGCCCTTTTTCAGGTGATGTGTACGGAACTAGCGGGACCCACACCACACATCCTCCTGCTAGTTCCTACATGGTGTATGATGGTGAGAGTGGCGGCAGAGCACATTATCCACCCCAACCTTCTCATTATGCTCAAGCTGGACATCCTCCAACCATTGCCTCCCTTGCAAACCCTGCACCACATAATGTTACGGTTTGGAATCGTAGCCAACCCTACAAGGAATTGATTGAGAAATTTGTGAGCATGGGAGTTAGAGGCGATCATGTGGTAAGCATTATACAGAGGATGGAGGAAACCCAGCAGCCTATAGATTTTAACTCAGTACTTGACCGGTTGAACGCGCATAATTCAGTGAGGGGATGGTCAGGGTAA 1677 0.4675 MASLPSGLSNGASKGFDFGSDDILSSFEEDNTNHDSSNIDPTKGSHASRMARSSIVPATAYSSSDDSLSQDVIATVEKSMKTHTDNLMRFLEGLSSRLSQLELYCYNLDKSIGAMRSDLNSDHEEADSRLKSLDKHLHEVHRSMLILRDKQELAETRKELAKLKHVQKESSSSSHSQSNEERSSPSSMDPKRIDNVSDTHNQELALALPHQVAPRQQLVASSYQVPAPNVSQTTQQPHYYLMPTPLPNPQAVPKLPQNQYLPSDPHYRISQATSSSSQVIQSPPVQQFSQYLQQLQHQQQQWPQQLPQQVQPPQPPTSMQSPIRPLLTNASTPYPTSQTTNPLPTETLPNSMPMQLPYSGIPPRGSSRGGGDAMPYPTSQATNPLPPETLPNSMPMQMPYSGIPTRGTSQGDAMPYGYGGVGRTVPQQPQPQHMKGPFSGDVYGTSGTHTTHPPASSYMVYDGESGGRAHYPPQPSHYAQAGHPPTIASLANPAPHNVTVWNRSQPYKELIEKFVSMGVRGDHVVSIIQRMEETQQPIDFNSVLDRLNAHNSVRGWSG 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0819 558 MobiDBLite consensus disorder prediction 321 354 - -
Aed1g0819 558 MobiDBLite consensus disorder prediction 162 195 - -
Aed1g0819 558 MobiDBLite consensus disorder prediction 27 51 - -
Aed1g0819 558 MobiDBLite consensus disorder prediction 238 261 - -
Aed1g0819 558 MobiDBLite consensus disorder prediction 299 380 - -
Aed1g0819 558 Coils Coil 146 166 - -
Aed1g0819 558 Pfam UBA-like domain (DUF1421) 507 551 IPR010820 -
Aed1g0819 558 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 376 - -
Aed1g0819 558 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 375 556 - -
Aed1g0819 558 MobiDBLite consensus disorder prediction 170 184 - -
Aed1g0819 558 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 375 556 - -
Aed1g0819 558 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 1 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0819 Aed-Chr1 8999434 9003859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0819 35 185 Trihelix Transcription Factor Family AT5G14540 28.758 9.73e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0819 - - gmx:100527106 715.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0819 1 8999434 9003859 Aed1g0819 1 8999434 9003859 ECH