Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0817 ATGGAGCAGTCTCTGCTGAGAGGCGAAAGCAGTAGCAGTGACGAGAGTCACCGGACGCGGGGAATATTCCGGCGCTCTGATGCCATCGCCTACGGCTCCAGCTACGAGAAAGCCGCGGCGTTCATCGATCTGGCTGAAGATGGTGTTGGTCTCCCTGAGGAAATTCTCGATTCACCAAACTTCCAAAGTTACATAAGATTTTATTTTATATTCAATAAATGCAATCTAATCTGGTCTCTTAGTTATTTTGCGTTGATAGTCCTGAATTTCCTGGAGAAACCTCTATGGTGTAAAAAGCTTATCACAAATTCCTGCAACGATAGAGAGTATTTCTTTTTGGGACAATTGCCGTATCTAACTGATGCAGAATGTCTTATTTATGAGGGAATAACTCTTGTTTTGCTATTCATACATATGTTCTTCCCATTGTCATACGAAGGATCCGGTATATTTTGGAAAAATACTATTAATCAATTGAAGGTTTTCTCTCTATTAGTTCTTGTTGCTGATGTGCTGCTCTATGCCCTTTATTTGTCTCCACTGGCTTTTAATTTTCTACCTTTCAGAATCGCACCTTATATCAGAGTTGTTCTTTTCGTTCTGAATATTAGGGAGCTACGAGAAACCATCATTATCTTGGTTGGGATGCTTGACACATACTTAAATGTCTTGGCTTTGTGGCTTCTGTTTCTTCTTTTTTCTAGTTGGGTGGCATATGTGTTTTTTGAGGATACAATACAGGGAAAAACAGTATTCACTTCCTATGGTACTACATTGTATCAGCTGTTTCTTTTATTTACCACATCCAATAATCCAGATGTTTGGGTTCCTGCATACAAGTCTTCACGTTGGTATTGCCTGTTTTTCATACTCTTTGTGCTGGTGGGGGTTTACTTTGTTACAAACTTGATTCTTGCCGTTGTTTATGACAGTTTCAAGAGTGAGCTTGTAAAACAAGTTTTTGAGAAGGATCGTTTGAGAAGAACTATGTTGGACAAAGCTTTTGATCTCCTGGATACACATAAAGTTAGATGTCTCAACAAAAATCAATGCATTATGCTCTTTGAGGAGCTGAACAAGTACAGGACTTTGCCAAAAATCTCCAGGGAAGACTTTGAGTCGATATTTGATGAGCTGGATGATAGTCATGATATAAAGATCAACAAGGATGAATTTGCAGATATTTGCAATGCCATTGGTTTAAAATTTCAGAAGGAAGATGTTATGTCTTACTTTGAATATTTATCATTCTACCATTGGCCCAGCTCCAAGAGATTAAAAGAATTTGTGAAGACTCCTATGTTTGGATACCTAGTGTCCTTTGTTCTCGTACTAAATCTGGTTGCTGTTGTTATTGAGACAACGCTTGATATAGAAAACAATTCTGCTCAAAAGGTGTGGCAAGTGGTTGAGTTCGTTTTTGGGTGGATATATGTAATAGAAATGGTTTTAAAGATTTATGCATATGGATTTGAGAACTATTGGCGGGATGGTCAAAATCGCTTTGATTTTATTATCACGGTGATAATTGTCATTGGAGAAACTGTAACTTTTGCTATACCTGATGATGATTTTCCTTTCATCTCAAATGGAGAATGGTATGAACTTTTACCTGAATGTCCGATTCGTTACCTTCTTCTGGCAAGAATGTTGAGATTAATAAGGCTCCTAATGCATGTCAAGCAATACCGAGCCTTTGTGGCAACTTTCTTGACTCTCATACCAAGTTTGATGCCATACCTAGGGATCATATTTTGTACCTTGTGTATTTATTGCTCAATTGGTGTACAGATTTTTGGTGGAATCGTTAATGCTGGAAACCCCGAATTGGAATTAACAGCCCTTGCTGAAAATGAGTATCCTTTGATAATCTATACTGTCTCCTTTAAGCCTGTTGTGTTTGGTGTGAATTTAATTCTGGCATATATATTGCTTCTGAAATGGGTAAATGTTGTTCTTGGAGTATCATTCTTGACCGAAAATAGCTATTTGGTTTTCAATTTCAATGATTACCCAAATGGAATTGTGACACTTTTCAATTTTCTCGTCACGGCAACCTGGGACGAAGTAATGACGAGCTACAAGGAATTAACTGGGACCGCTTGGACCTATTTGTACTTCATTAGCTTCTACTTAATTACTGTTTTGCTGCTTTTGAACTTGGTACGGTTATTGCTTTTGTCTTGGAGGCATTCTTTGCCGAAATGGAACTTGAGTCATCAGAAACTGAAGGAAATGACAAGCACAAAAACACGAAGCCAGAGGGTTGATGTTCTTCTTCATTATATGTTGAGTAGTGAGTTGTGTCAAAATGAGTCTTCCAGTGCACAAACTTCATAA 2340 0.3803 MEQSLLRGESSSSDESHRTRGIFRRSDAIAYGSSYEKAAAFIDLAEDGVGLPEEILDSPNFQSYIRFYFIFNKCNLIWSLSYFALIVLNFLEKPLWCKKLITNSCNDREYFFLGQLPYLTDAECLIYEGITLVLLFIHMFFPLSYEGSGIFWKNTINQLKVFSLLVLVADVLLYALYLSPLAFNFLPFRIAPYIRVVLFVLNIRELRETIIILVGMLDTYLNVLALWLLFLLFSSWVAYVFFEDTIQGKTVFTSYGTTLYQLFLLFTTSNNPDVWVPAYKSSRWYCLFFILFVLVGVYFVTNLILAVVYDSFKSELVKQVFEKDRLRRTMLDKAFDLLDTHKVRCLNKNQCIMLFEELNKYRTLPKISREDFESIFDELDDSHDIKINKDEFADICNAIGLKFQKEDVMSYFEYLSFYHWPSSKRLKEFVKTPMFGYLVSFVLVLNLVAVVIETTLDIENNSAQKVWQVVEFVFGWIYVIEMVLKIYAYGFENYWRDGQNRFDFIITVIIVIGETVTFAIPDDDFPFISNGEWYELLPECPIRYLLLARMLRLIRLLMHVKQYRAFVATFLTLIPSLMPYLGIIFCTLCIYCSIGVQIFGGIVNAGNPELELTALAENEYPLIIYTVSFKPVVFGVNLILAYILLLKWVNVVLGVSFLTENSYLVFNFNDYPNGIVTLFNFLVTATWDEVMTSYKELTGTAWTYLYFISFYLITVLLLLNLVRLLLLSWRHSLPKWNLSHQKLKEMTSTKTRSQRVDVLLHYMLSSELCQNESSSAQTS 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0817 779 Gene3D - 566 722 - -
Aed1g0817 779 Gene3D - 313 397 - -
Aed1g0817 779 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 1 774 IPR044581 GO:0005245
Aed1g0817 779 Gene3D - 424 565 IPR027359 -
Aed1g0817 779 SUPERFAMILY Voltage-gated potassium channels 432 722 - -
Aed1g0817 779 SUPERFAMILY EF-hand 315 398 IPR011992 -
Aed1g0817 779 ProSiteProfiles EF-hand calcium-binding domain profile. 367 402 IPR002048 GO:0005509
Aed1g0817 779 Gene3D - 205 312 - -
Aed1g0817 779 Pfam Ion transport protein 132 314 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aed1g0817 779 Pfam Ion transport protein 433 722 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0817 1 778 Ion Channels AT4G03560 58.555 0.0 926
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0817 K16900 - gmx:100806160 1223.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0817 1 8971157 8990788 Aed1g0817 1 8971157 8990788 ECH