Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0812 ATGTCTCCACTGAAGCTCCTTGTCATTCTTCTTTACACTGTAACCACTTTGAGCTCAGTTTCCACTACTGAATTTGTCTATAACACAAACTTCAACTCCACAAATATCATCCTATATGGAAATGCCTCTACTCAGAACTCCATTCTTACTCTCACAAATCAAAGTTTCTTCTCCATAGGCCGTGCTTTTTACCCTCACAGAATACCTACCAAACTAGCCAACTCTTCCACCTTCCTCTCCTTTGCAACCTCCTTCATTTTCTCAATTGCCCCCGTTAAAAACTTCATCACTGGCCATGGCTTTGTCTTCCTATTCACGCCATCGAGAGGTGTAAATGGCACGACCTCGGCTGAGTATATCGGTCTTTTCAATCGCAGCAATGAAGGCAATCCTCAGAACCATGTTTTTGGAGTTGAGTTTGATCCAGTCAGAAATGAAGAGTTCAACGATACAAGTGACAATTATGTTGGTGTTGACATAAACTCACTTCATTCCTCGACTTCACATGAGGCTGGTTATTGGAGTGGAAAAGGTGACAAAGAATTTAAGGTGTTGGATATAAAAAATGGAGAAAACTATCAGGTATGGATTGAATTTATGCATTCCCAGCTTAACGTTACTATGGCTCGCGCGGGACAAAAGAAGCCTAGAGTGCCTCTTATCAGCAGTAATGTTAACCTTTCAGGGGTTCTTATGGATGAAACATACGTTGGATTCACTGCAGCAACAGGGAGGATAATAGACAGTGCTAAGATTCTTGCTTGGAGTTTTAGTAATTCAAATTTTTCAATTGGTGATGCATTAGTGACAGAAAATTTGCCTTCATTTGTTCATCATAAAAGTTGGTTTTCTGGAGCACGAGTTATAGCTGTTGGTGTCACCAGTAGTATTGTGTGTGTCTTAATCATTGGTTGTGGTTATGTAGTGTTTTTCATTCTCCACAGAAGCAAGGCACAAGAAGAAGTTGAAGATTGGGAACTGGAGTACTGGCCTCATAGGATTGGTTTCCATGAGATTGATGCAGCAACAAGAGGGTTTTCTGAAGAGAATGTGGTTTCTGTAGGAGGGAACGGGAAGGTATATAAAGGGGTTTTGCATGGAGTAGAAGTTGCAGTCAAGAGAATCCCTCAAGAAAGGGAAGAAGGGATGAGAGAGTTTTTGGCTGAGGTTTCAAGCCTTGGAAGAATGAAGCACAGAAATCTAGTAAGATTGAGAGGCTGGTGCAAAAAAGAAAGGGGAAATTTGATTCTGGTTTATGACTTCATGAGCAATGGAAGTTTAGACAAAAGAATATTCGACCAATTGCACAGTGCTGTTGATGAAAGGTTGAAGGCTAAAGGGGGATACACCATAGAGGAAGCTGAGAGATTGCTTCATTTGGGTTTGTTGTGTTCAAATTCAGACCCTAGTATTAGACCAACAATGAGGCAGGTTGTGAAAATTTTGGAGGGGGAAATTGACAGCATTGAGTCTGATCATGAAGAAAACATGGAGATGAGTTTGCTTGCAAAAATAAAATCAGCTGCAATGTGGTCTAGAGCTGAACGTGCTTTACCACACAGTGGTTACCCTTCTTTTGATGAAATTAAGATGTTCAGTTTTAATTCTAGGACTTCTCGAAGTGGCTCAAGTACCTTTCCAGGATCAGAATCAGAAATCACCAGAGAAAACAGATGA 1677 0.4073 MSPLKLLVILLYTVTTLSSVSTTEFVYNTNFNSTNIILYGNASTQNSILTLTNQSFFSIGRAFYPHRIPTKLANSSTFLSFATSFIFSIAPVKNFITGHGFVFLFTPSRGVNGTTSAEYIGLFNRSNEGNPQNHVFGVEFDPVRNEEFNDTSDNYVGVDINSLHSSTSHEAGYWSGKGDKEFKVLDIKNGENYQVWIEFMHSQLNVTMARAGQKKPRVPLISSNVNLSGVLMDETYVGFTAATGRIIDSAKILAWSFSNSNFSIGDALVTENLPSFVHHKSWFSGARVIAVGVTSSIVCVLIIGCGYVVFFILHRSKAQEEVEDWELEYWPHRIGFHEIDAATRGFSEENVVSVGGNGKVYKGVLHGVEVAVKRIPQEREEGMREFLAEVSSLGRMKHRNLVRLRGWCKKERGNLILVYDFMSNGSLDKRIFDQLHSAVDERLKAKGGYTIEEAERLLHLGLLCSNSDPSIRPTMRQVVKILEGEIDSIESDHEENMEMSLLAKIKSAAMWSRAERALPHSGYPSFDEIKMFSFNSRTSRSGSSTFPGSESEITRENR 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0812 558 Gene3D Phosphorylase Kinase; domain 1 309 421 - -
Aed1g0812 558 PANTHER - 434 546 - -
Aed1g0812 558 PANTHER - 1 433 - -
Aed1g0812 558 Pfam Protein tyrosine and serine/threonine kinase 351 434 IPR001245 GO:0004672|GO:0006468
Aed1g0812 558 SUPERFAMILY Protein kinase-like (PK-like) 326 436 IPR011009 -
Aed1g0812 558 CDD lectin_legume_LecRK_Arcelin_ConA 23 260 IPR001220 GO:0030246
Aed1g0812 558 MobiDBLite consensus disorder prediction 537 558 - -
Aed1g0812 558 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 260 IPR013320 -
Aed1g0812 558 Gene3D - 21 270 - -
Aed1g0812 558 Pfam Legume lectin domain 23 261 IPR001220 GO:0030246
Aed1g0812 558 PANTHER LECTIN RECEPTOR KINASE 434 546 - -
Aed1g0812 558 PANTHER LECTIN RECEPTOR KINASE 1 433 - -
Aed1g0812 558 ProSiteProfiles Protein kinase domain profile. 346 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g0812 558 MobiDBLite consensus disorder prediction 537 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0812 Aed-Chr1 8940413 8942488 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0812 20 458 Receptor kinase-like Gene Family AT4G04960 52.097 8.55e-149 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed1g0812 Lectin_legB 5.2e-56 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0812 - - gmx:100804553 771.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0860 5 6502832 6504859 Aed1g0812 1 8940413 8942488 PCT