Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0811 ATGATGTGTCCTCGTACTTTGTTTTTCCTCGTTTCAAATCTTCAAGTTCTGCTGAGTTGTGTGTCAGCAACTGAATTTGTTTACAACAGAAACTTCAACTCCTCCAACGTGAAACTCTATGGGAATGCCACCATAGAAAAGTCGGTTATTGAACTCACAAACCAAACTTTCTACGCCATAGGGCGTGCCTTTTACCCTCACAAAGTACCCATGAAGATGAAATCTACCACCCTTCTTCCCTTTGCAACCTCTTTCATCTTCTCCATGGCTCCCTGCAAGAACTTCCCTGTGGCTCATGGCTTTGCGTTAGTTTTCACGCCCGTGATGGCTGCAAATGGAGCACTCTCGGGGAACTACTTGGGCCTCTTCAACCGCGCCACTTCAGGTAACTCTTCCAACCATGTTTTTGCGGTTGAATTTGATGACTTTAGGAACGAGGAGTTCAACGAGGTGAATGATAACCATGTGGGTGTGGACTTGAATTCGATTATTTCGGAGTATTCGGAGCCTGCTGGGTTCTGGGGTGGGAGAGAGGGTGAAGAGGAGTTGGAGGATTTGAAGCTTGCTGATGGTAGAAACTATCAGGTTTGGATTGAGTTTGAGAATTCGGTGATTAATGTTACTATGGCACCAGCAGGGACAAAGAAGCCTCATAGGCCTTTGATTAGTAAGCCTATTAACCTTTCTTTTGTCTTGTTGGATGAAATGTATGTTGGGTTTTCTGGGGCAACGGGGAGAATGGTCGACATTTGTAGAATCTTGGCTTGGAGTTTTAGCAATTCTAACTTTTCAATTGGTGATGCTTTGAGTACCAAGCATTTGCCTCTGTATGTGCATCCAAAGACATTGGTGTTTAGATCAAATGGTTTCATTATAGGTGTAACTTTTGGGGCTTTTTTTGTGGGGGGCTTCTGTGCTTTGGTGGTTTTCTACAGTTTGTTCAGAACCAGAAGGGAAGAGAGGCAGGAAAATTTTGAAGACTGGGAATTGGAGTATTGGCCACACAGGATTATCTATCAGGAGATTTGTGATGCAACAAGTGGATTCTCTGAAGAGAAAGTGATTGGGATTGGAACAAGTGGGAAGGTATACAAGGGGGTTTTGAAGGGAGTGGAAGTTGCAGTGAAGAGCATCAATCATGAGACTCGCCACGGAATGAGAGAGTTTCTGGCAGAGATTTCAAGCCTAGGCAGAATGAAACACAGGAATTTAGTGGGTTTCAGAGGGTGGAGTAAAAGAAAAGGAGGAAAACTGATACTTGTTTATGATTACATGGTGAATGAGAGCTTGGACAAAAGGATCTTTGAGTGTGAAGGGTCCAAGCTTTTGAGCTGGGAAGAAAGAATTAGAGTTTTGCAAAACGTAGCTGATGGAATCTTATATCTACACGAGGGTTGGGAAGTTGAGGTCTTGCATAGGGACATCAAATCTAGTAATGTCCTACTTGACAAGAATATGAATGCTAGATTGGGGGATTTTGGGCTTGCAAGGTTGCATCACCAGGAACATGTGGTTGACACAACAAAAGTGATAGGGACTCTGGGCTACATGGCACCGGAACTAGTCCGAATCGGGCGACTGTCAGCTGCGTGTGATGTGTATAGTTTTGGAGTATTGATTTTAGAAGTGGTGTGTGGAAGAAGACCCATCTTAGCAGATCAGCCACCATTGGTTGATTGGGTGTTTTCCCTGATGGATAATGAGGAGTTGAGTTGTGCTATTGATGAGCGTTTGAAGAGTCAAATTGGATACAATGCTGAGGAAGCTGAGAGGCTAATTCATTTGGGTTTGTTATGTGTGAGCACAGAACCTGGTGTTAGGCCAACAATGAGGCAAGTGGTGAAAGCATTGGAGGGAATAAAATGCACCGAGTGTAATGAAGAGTGCATCCATTTGGGTCTACTTGGAAAAATCAACTCAGCAGCATCATGGTCTAAGAGTTCTACAAGTTCTGCCAATATAAATTATCCTACCTTCGATGAAATTTTGCAGACCAAGTTTTATTCTACACAATCTTTAAGCATCTCTTGTCCCAGTCCACAGCTAGATTCAGAGTTTGTCTCAGAAGGAAGGTGA 2076 0.4345 MMCPRTLFFLVSNLQVLLSCVSATEFVYNRNFNSSNVKLYGNATIEKSVIELTNQTFYAIGRAFYPHKVPMKMKSTTLLPFATSFIFSMAPCKNFPVAHGFALVFTPVMAANGALSGNYLGLFNRATSGNSSNHVFAVEFDDFRNEEFNEVNDNHVGVDLNSIISEYSEPAGFWGGREGEEELEDLKLADGRNYQVWIEFENSVINVTMAPAGTKKPHRPLISKPINLSFVLLDEMYVGFSGATGRMVDICRILAWSFSNSNFSIGDALSTKHLPLYVHPKTLVFRSNGFIIGVTFGAFFVGGFCALVVFYSLFRTRREERQENFEDWELEYWPHRIIYQEICDATSGFSEEKVIGIGTSGKVYKGVLKGVEVAVKSINHETRHGMREFLAEISSLGRMKHRNLVGFRGWSKRKGGKLILVYDYMVNESLDKRIFECEGSKLLSWEERIRVLQNVADGILYLHEGWEVEVLHRDIKSSNVLLDKNMNARLGDFGLARLHHQEHVVDTTKVIGTLGYMAPELVRIGRLSAACDVYSFGVLILEVVCGRRPILADQPPLVDWVFSLMDNEELSCAIDERLKSQIGYNAEEAERLIHLGLLCVSTEPGVRPTMRQVVKALEGIKCTECNEECIHLGLLGKINSAASWSKSSTSSANINYPTFDEILQTKFYSTQSLSISCPSPQLDSEFVSEGR 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0811 691 SUPERFAMILY Concanavalin A-like lectins/glucanases 18 261 IPR013320 -
Aed1g0811 691 PANTHER LECTIN RECEPTOR KINASE 7 672 - -
Aed1g0811 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Aed1g0811 691 Gene3D Transferase(Phosphotransferase) domain 1 425 631 - -
Aed1g0811 691 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Aed1g0811 691 Gene3D - 22 270 - -
Aed1g0811 691 SMART serkin_6 349 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g0811 691 ProSiteProfiles Protein kinase domain profile. 349 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g0811 691 ProSitePatterns Protein kinases ATP-binding region signature. 355 376 IPR017441 GO:0005524
Aed1g0811 691 SUPERFAMILY Protein kinase-like (PK-like) 323 618 IPR011009 -
Aed1g0811 691 Gene3D Phosphorylase Kinase; domain 1 311 424 - -
Aed1g0811 691 Pfam Legume lectin domain 24 262 IPR001220 GO:0030246
Aed1g0811 691 CDD STKc_IRAK 355 620 - -
Aed1g0811 691 CDD lectin_legume_LecRK_Arcelin_ConA 24 261 IPR001220 GO:0030246
Aed1g0811 691 PANTHER - 7 672 - -
Aed1g0811 691 Pfam Protein kinase domain 350 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0811 Aed-Chr1 8937266 8939341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0811 21 566 Receptor kinase-like Gene Family AT4G04960 54.069 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed1g0811 Pkinase 9.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0811 - - gmx:100804025 1176.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0811 1 8937266 8939341 Aed5g0860 5 6502832 6504859 PCT