Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0810 ATGGCTGATCATCAGCAGGGAGAACAACCTTCTTCAACCAAAGGGATCGAAAGAAGGATTGCAGAAAAAAACAGGAGAAACCATATGAAGAACCTCTGTTCCAAGCTTAACTCTCTTCTCCCTAACAATAATAATCCCAGGGCTTGTCCCTCCCTCCCTCCCTCCCTCCCTGCACCGTGCATGCATGGAGAAGCCATATCACGTGTTGATCAAATAGAGGAGGCTATCAACTACATAAAGAACCTAGAAACAAAGGTGAAGATGGCGCAGGAGAAGAAAGAAAGCTTAATAATGCAAAGGAATGGATCTCGCAGTGAAGCACCAAAAATTGAGATTCATGAAGTGGGTTCCTCGCTGCAAATCATTCTGATGTGTAGGTTTGATAATCAGTTCCTTTTCAGTGAAATTATTCGCATACTGCATGAAGAAAACATAAAGGTCAAGCGTGTCCATTCTTCACTCGCTGGAAACTCAATGCTACATGTTGTGCACGCAAAACAATTCTTTCAACAAGGAACAACCGCAACGAGTGAGAGACTGAAAAGGTTCGTGGACGGAGATCGGGAGAAATAG 573 0.4363 MADHQQGEQPSSTKGIERRIAEKNRRNHMKNLCSKLNSLLPNNNNPRACPSLPPSLPAPCMHGEAISRVDQIEEAINYIKNLETKVKMAQEKKESLIMQRNGSRSEAPKIEIHEVGSSLQIILMCRFDNQFLFSEIIRILHEENIKVKRVHSSLAGNSMLHVVHAKQFFQQGTTATSERLKRFVDGDREK 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0810 190 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 13 82 IPR011598 GO:0046983
Aed1g0810 190 Pfam Helix-loop-helix DNA-binding domain 18 83 IPR011598 GO:0046983
Aed1g0810 190 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 19 100 IPR036638 GO:0046983
Aed1g0810 190 Coils Coil 72 99 - -
Aed1g0810 190 Gene3D - 16 112 IPR036638 GO:0046983
Aed1g0810 190 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 11 187 - -
Aed1g0810 190 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 11 187 IPR015660 GO:0003700|GO:0006357
Aed1g0810 190 SMART finulus 19 88 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0810 Aed-Chr1 8921090 8922207 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0810 13 186 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 29.744 6.92e-21 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aed1g0810 HLH 3.5e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0810 - - aprc:113855892 183.341