Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0808 ATGAAGAACCTCTATTCCCAACTCAACTCTCTTCTCCCTAATCCCAACCCCAAGGAAGCGATACCAGATCAACTAGATGAAGCTATTGACTACATCAAAAGCTTAGAGACAAATGTGAAGACGGCGCAGGAGAAGAAAGAAAGGTTAATGGAAAGGAATAGAACTCGTGGTGGCTGCTCTAGTTCTGCTACTCAAGCACAAGGAAGCCAAAAAGCGCAGCAAAAAATTGAGATTCATGAAATGGGTTCTTCGCTTGAAGTGATTCTAACATGCGGGGTCGATAACGAGTCCATTTTCAGAGAAACCATTCGAATATTGCATGAAGAGAACGTGGAGGTCGTCACTGTCAATTCTTCAATGGTTGGAGACTCCATGTTTCATGTTGTGCACGGCCGACAGGTTGGGCAACCTATGTTTCAATATGGAGCGAACAAAGTGAGTGAGAGGCTGAAAAGGTTTGTAAACGGAGGAAGCATGAGCAATGTGGAGATAGATCCTGAATTTTGGGGGTTTGAATTTGGTATCACTGAGACTGACACGTGA 543 0.4401 MKNLYSQLNSLLPNPNPKEAIPDQLDEAIDYIKSLETNVKTAQEKKERLMERNRTRGGCSSSATQAQGSQKAQQKIEIHEMGSSLEVILTCGVDNESIFRETIRILHEENVEVVTVNSSMVGDSMFHVVHGRQVGQPMFQYGANKVSERLKRFVNGGSMSNVEIDPEFWGFEFGITETDT 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0808 180 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 49 IPR036638 GO:0046983
Aed1g0808 180 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 161 IPR015660 GO:0003700|GO:0006357
Aed1g0808 180 MobiDBLite consensus disorder prediction 49 68 - -
Aed1g0808 180 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 1 161 - -
Aed1g0808 180 Gene3D - 1 57 IPR036638 GO:0046983
Aed1g0808 180 Coils Coil 25 52 - -
Aed1g0808 180 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 35 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0808 Aed-Chr1 8905124 8906118 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0808 1 156 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 36.970 7.62e-23 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0808 - - gmx:100784042 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0808 1 8905124 8906118 Aed1g0808 1 8905124 8906118 ECH