Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0807 ATGGATCATCAACGGGGAAGTCAACCTTCTTCAACCAAAGTCGAGAGGAAAACCGTAGAGAAAAACAGGAGAATCCAGATGAAGAACCTCTATTCCAAACTCAACTCTGTTCTTCCTAACTATAATCCCAAGGAATTAGCGATGCCACTGCATGATAGAGTAGATGAAGCAATCAACTACATCAAAAGTCTAGAGACAAGAGTGAAGATGGCGCAGGAGAAGAAAGAAAGGTTAATGAAAAGGAAGATAAGTGCTTCTGATCATGAAGCACAAGGAAGCCTAAAACCGCCAAAAATTGAGATTCATGAGACGGGTTCTTCGCTTGAAGTCATTCTAACATGTGGGGTCGATGACCAATTCATTTTCTGTGAAATCATTCGAATATTGCATGAAGAGAACGTAGACGTGATCACTGCCAATTCTTCAATGGTTGGAGATTCAATGCTTCATGTTGTGCGTGGGGAGGCATGTATAATTATTATTGTTATATTAGTTCGGCAATCTTTGTTTGAATTTGGAGGCACGAAAGTGAGTGAGAGGCTGAAAAAGTTTGTAAACGGATCCACCAGTGATGTGGAAATAGAGCCACAGTTGTGGGATTTTGAAATGGGTACTGAGGTGTGGGAGCTTCTAGATCCTACAATATTAGACAACTCTTTATCATCGATTCCTTTTTAA 678 0.4027 MDHQRGSQPSSTKVERKTVEKNRRIQMKNLYSKLNSVLPNYNPKELAMPLHDRVDEAINYIKSLETRVKMAQEKKERLMKRKISASDHEAQGSLKPPKIEIHETGSSLEVILTCGVDDQFIFCEIIRILHEENVDVITANSSMVGDSMLHVVRGEACIIIIVILVRQSLFEFGGTKVSERLKKFVNGSTSDVEIEPQLWDFEMGTEVWELLDPTILDNSLSSIPF 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0807 225 Gene3D - 3 92 IPR036638 GO:0046983
Aed1g0807 225 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 8 192 IPR015660 GO:0003700|GO:0006357
Aed1g0807 225 Coils Coil 54 81 - -
Aed1g0807 225 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 8 192 - -
Aed1g0807 225 MobiDBLite consensus disorder prediction 1 22 - -
Aed1g0807 225 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 9 81 IPR036638 GO:0046983
Aed1g0807 225 Pfam Helix-loop-helix DNA-binding domain 14 65 IPR011598 GO:0046983
Aed1g0807 225 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 11 64 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0807 Aed-Chr1 8900244 8901300 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0807 1 187 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 36.816 1.60e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aed1g0807 HLH 5.7e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0807 - - gmx:100784042 274.248