Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0805 ATGGATCAACAACAACAGGGAAGAGTCGAGAGAAAGGTTGTAGAGAAAAACAGGAGAATCCAGATGAAGATCCTCTATTCCCAACTCAACTCTCTTCTTCCTACCTATAATCCCAGGGAAGCGATGCCACTGCCTGATCAAGTAGACGAAGCAGCCAACTACATCAAAAGCCTAGAGACAAAACTGAAGATGGCGCAGGAGAAGAAAAAAAGTTTATTAATGGGCAGGAAGAGAACTCGTGGTGGCTGCTCGAGTTCTTCTTCTGAAGCACAAGGAACCCTGAAATCGCCAAAACTCGAGATTCATGAAACGGGTAATTTGCTTGAAGTCATTCTAATATGTGGGGTTCATAACCAGTTCATGTTCTGCGAAATTATTCGAATGTTGCATGAAGAGAACGTCGAGGTCCTCAGTGCCAATTCTTCAACGATTGGAGATTTAATGATACATGTTGTGCACGGGGAGGTTCGGCAATCTATCTTTCAATTTGGAGCGACCAAAGTGAGTGAGAAGCTGAAATGGTTTGTAAACGGATCCTTCAGTGATGTGGAAGAAATGGAGCCTGAATTAATATGGCCTTTATATCAAATTGATCATACTACTGAGCTGTCTGGGCTTCTAGATCTTACAGTACTGCAGGACAATGGCTTACCACCAAATCCTTTGTAA 669 0.4275 MDQQQQGRVERKVVEKNRRIQMKILYSQLNSLLPTYNPREAMPLPDQVDEAANYIKSLETKLKMAQEKKKSLLMGRKRTRGGCSSSSSEAQGTLKSPKLEIHETGNLLEVILICGVHNQFMFCEIIRMLHEENVEVLSANSSTIGDLMIHVVHGEVRQSIFQFGATKVSEKLKWFVNGSFSDVEEMEPELIWPLYQIDHTTELSGLLDLTVLQDNGLPPNPL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0805 222 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 3 183 IPR015660 GO:0003700|GO:0006357
Aed1g0805 222 Gene3D - 1 86 IPR036638 GO:0046983
Aed1g0805 222 MobiDBLite consensus disorder prediction 73 96 - -
Aed1g0805 222 Coils Coil 48 75 - -
Aed1g0805 222 Pfam Helix-loop-helix DNA-binding domain 8 59 IPR011598 GO:0046983
Aed1g0805 222 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 3 183 - -
Aed1g0805 222 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 6 58 IPR011598 GO:0046983
Aed1g0805 222 MobiDBLite consensus disorder prediction 80 94 - -
Aed1g0805 222 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 5 76 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0805 Aed-Chr1 8888479 8889517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0805 5 178 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 40.884 8.30e-37 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aed1g0805 HLH 9.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0805 - - gmx:100784042 302.753