Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0787 ATGACTCAGTGCAGTTACTCTGAAAACAACCATAGCATCATTGTGGAGAGGCACAAAGATAGCTTGATCAGAACATGTCCTACATGTGGCCATCATGTCAAATGCCAAGAGCAGGCTGCTGGAATTCATGACTTGCCTGGACTTCCTGCTGGAGTGAAGTTTGATCCTACTGATCAAGAGATTCTTGAACATTTGGAAGCAAAGGTGCGGTCTGATATTCACAAGCTTCATCCTTTAATTGATGAGTTCATTCCTACTCTTGAAGGCGAGAATGGAATCTGCTGTACCCATCCAGAGAAGTTGCCAGCGTACACGACTGGAACAAGGAAAAGGAGAAAAGTGCACACAGATGAAGATGGCAGTGAGACTCGGTGGCACAAAACAGGTAAGACTAGGCCAGTCTTCATCAGTGGCAGGTTAAAAGGGTACAAGAAAATCCTTGTGCTTTACACCAACTACAGAAAACAAAGGAAACCAGAGAAAACAAACTGGGTCATGCACCAATACCACCTTGGCAACAATGAAGAGGAGAAGGAAGGGGAGTTGGTGGTCTCCAAAGTTTTCTATCAAACACAACCTAGACAATGTGGCTCATTAATGAAAGACTCATATCCTGCAAAACTAACTCATGGTGAAGGTGTGCATGAGGTTGCTAATCACAAAAACACTGGCTATGTTGAGTACTACAATAACTCTTTTGTGTCCTTTGATCAAGGGGACCAGCATAGGTCCAGCACTGCACAATTAGTCTCCCATTTCCCTGTGCATGATGGCGCTACTTTCATTCCTTGA 792 0.4407 MTQCSYSENNHSIIVERHKDSLIRTCPTCGHHVKCQEQAAGIHDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICCTHPEKLPAYTTGTRKRRKVHTDEDGSETRWHKTGKTRPVFISGRLKGYKKILVLYTNYRKQRKPEKTNWVMHQYHLGNNEEEKEGELVVSKVFYQTQPRQCGSLMKDSYPAKLTHGEGVHEVANHKNTGYVEYYNNSFVSFDQGDQHRSSTAQLVSHFPVHDGATFIP 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0787 263 MobiDBLite consensus disorder prediction 107 126 - -
Aed1g0787 263 Gene3D NAC domain 57 194 IPR036093 GO:0003677|GO:0006355
Aed1g0787 263 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 262 - -
Aed1g0787 263 Pfam No apical meristem (NAM) protein 49 171 IPR003441 GO:0003677|GO:0006355
Aed1g0787 263 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 262 IPR044799 GO:0003700
Aed1g0787 263 SUPERFAMILY NAC domain 43 190 IPR036093 GO:0003677|GO:0006355
Aed1g0787 263 ProSiteProfiles NAC domain profile. 48 190 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0787 Aed-Chr1 8768414 8770238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0787 24 207 NAC Transcription Factor Family AT4G28500 73.762 6.80e-102 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aed1g0787 NAM 7.7e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0787 - - gmx:100791648 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0787 1 8768414 8770238 Aed1g0787 1 8768414 8770238 ECH