Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0785 ATGCTAGAAAAGATTGATGATGGAGAAATCTCAAATGCTTTTCCCAATCACCAGAACCCTTCAACTGCTGCATCTGATAATAACCATCCTCCTCTCTTGAAGAGGAAGAGAAACCTCCCTGGAAATCCAGGCAAATTCGTGTGTGAAATTTGTCTCAAGGGTTTCCAAAGGGACCAAAACCTTCAACTCCACCGACGAGGGCACAACCTTCCTTGGAAGCTGAAGCAGAGAACAAGCAAAGAAGTAAGGAAGAGAGTTTATGTGTGTCCAGAGAAGACATGTGTACACCACCACCCTTCAAGGGCTCTGGGAGACTTAACTGGGATTAAAAAGCACTTCTGCAGAAAGCACGGTGAGAAGAAGTGGAAGTGCGAGAAGTGCTCAAAGCGTTATGCTGTTCAGTCAGATTGGAAAGCACACTCAAAAACCTGTGGCACCAGAGAATACAAATGTGACTGTGGCACTGTCTTTTCACGGAGAGATAGCTTCATCACTCACAGGGCCTTCTGCGATGCCTTAGCAGAAGAAACAGCTAGGGTGAACGCAGTAACAAACATCAGCAACTACAGCATCATGCAAAATCCTCTAGGTCCTAACATGGCAACCCATTTTTCATCATTTTTCAAGCCAAATTCTTCATGCCCTGAGGAGCCAGTAGTCCAAGGTAATCAAACATCTAATAAGGGCCTATCCCTTTGGATGAGTACTCAAACATCTCATCAGGCTCATGCGACAATGGTTAACAACAACAATGTCAATTTGCATGAATTTCATCAACTTGGGTCTGCTACAACTACTACAAGCCCAACAGCAATTTATGGTACTAGTGGAAATCCACTTGCTCCATGCTCAAATCCACCACCCTCTAATTACCAGCTAAATTGGGTGTTTGGTGGAAATAATAAACTCTCCTCCAATATTGGAAGCCATCAACAAGAGCTAACTAGCAGTACTGTTTCACTTCCACTAGTCCACAATAACATTATTGTTAAGGATGATAATAACCCAAATCTGCAGCAACAACTCATAAGTGTCCCTTCCTTGTATAGCTCACAACACCAATCCCATCATCAAACAACCTCAGCAAACATGTCAGCCACAGCTTTGTTGCAAAAAGCTGCACAAATTGGGACAACTACTTCATCGGACCCATCATCATTATTCCTTGGGAGCATAGGTTTGAAATGCAACAGTCCAGGCCAAGATGGGAACAAATTTTGTGGCATTATGTACGGTTCAACTTCAGTGCTCACAAGTCATGAGGCAGAGAATAATAATAATAATAATTATTCAGGTGATTTGACACAAATGCCCCCTGCAAAACGACGCCACGTGCAGAATGAAGACAGTGCATGGGGACAAACTAGGGATTTTCTTGGTGTTGGTGCTGCCAACCATTTGCCACCCTTCATCAATCAGCGGATGGATTTGATCTGA 1437 0.4342 MLEKIDDGEISNAFPNHQNPSTAASDNNHPPLLKRKRNLPGNPGKFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDALAEETARVNAVTNISNYSIMQNPLGPNMATHFSSFFKPNSSCPEEPVVQGNQTSNKGLSLWMSTQTSHQAHATMVNNNNVNLHEFHQLGSATTTTSPTAIYGTSGNPLAPCSNPPPSNYQLNWVFGGNNKLSSNIGSHQQELTSSTVSLPLVHNNIIVKDDNNPNLQQQLISVPSLYSSQHQSHHQTTSANMSATALLQKAAQIGTTTSSDPSSLFLGSIGLKCNSPGQDGNKFCGIMYGSTSVLTSHEAENNNNNNYSGDLTQMPPAKRRHVQNEDSAWGQTRDFLGVGAANHLPPFINQRMDLI 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0785 478 MobiDBLite consensus disorder prediction 12 28 - -
Aed1g0785 478 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 45 477 - -
Aed1g0785 478 PANTHER F-BOX ASSOCIATED PROTEIN 45 477 - -
Aed1g0785 478 ProSiteProfiles Zinc finger C2H2 type domain profile. 46 68 IPR013087 -
Aed1g0785 478 MobiDBLite consensus disorder prediction 1 38 - -
Aed1g0785 478 Gene3D Classic Zinc Finger 115 179 - -
Aed1g0785 478 ProSitePatterns Zinc finger C2H2 type domain signature. 48 68 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0785 Aed-Chr1 8760255 8762957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0785 30 463 IDZ Gene Family AT1G03840 47.826 4.78e-123 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aed1g0785 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0785 K25870 - gmx:100778666 769.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0785 1 8760255 8762957 Aed1g0785 1 8760255 8762957 ECH