Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0775 ATGAGTTACTTCTTCGATGATCACGAGCATGCTTTCCGTGACCACAACGACTTCAACAGAAGGATACTGATCATGGCCATAGTTTCCTTATCAGTGGTCTTGGTTCTGGTCTTCGCGCTTCACCTCTACGCAAGGTATTTCCTCCGGCGCCAAACTCGGCGCCGAGCCGCCATATACCAACTCAGCCTCAACGTGGCTAACGCAAACGCACACGCCGAGCCACACAACACGGGTCTCGACCCAACCCTCATCACCGCCCTCCCCACCTTCCCCTTCAAACAAAACCACCACGATTCTGCACCGGAGTGTGCCGTGTGCTTGAGCGTTCTAGAAGACGGTGAACACGTGCGGCTTCTTCCCAATTGCAAACACAGCTTCCACATCCCCTGCATCGACACGTGGCTCGCCTCGCACTCCACGTGTCCCATTTGTCGGACCAAGGCCCAACCGCCCGTAGTCCGCCTCGAACCGCAGCCGCGTGAGGGCCCCACCGGGTTTGTTCCTGCCGATGTTGTTGCACCCACGGCTCCGCTGTTGTTGGAAAACAACGTGGAAGGAACCTCGGATGGTGCTAAAGTTGTTAGTGGTTCGAATTCGAGGTTGAGTTCGTTCCGAAAGATTCTTAGTAGGGAGATATCGATGAGGAGGATCCAACCTTCTTCTACTTCTACTTCTACCCATGATCATGATGTTGATCAACATGACTTAGAGAGGCAGTGA 720 0.5403 MSYFFDDHEHAFRDHNDFNRRILIMAIVSLSVVLVLVFALHLYARYFLRRQTRRRAAIYQLSLNVANANAHAEPHNTGLDPTLITALPTFPFKQNHHDSAPECAVCLSVLEDGEHVRLLPNCKHSFHIPCIDTWLASHSTCPICRTKAQPPVVRLEPQPREGPTGFVPADVVAPTAPLLLENNVEGTSDGAKVVSGSNSRLSSFRKILSREISMRRIQPSSTSTSTHDHDVDQHDLERQ 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0775 239 PANTHER RING-H2 FINGER PROTEIN ATL40-LIKE 14 239 - -
Aed1g0775 239 SUPERFAMILY RING/U-box 83 151 - -
Aed1g0775 239 SMART ring_2 103 144 IPR001841 -
Aed1g0775 239 ProSiteProfiles Zinc finger RING-type profile. 103 145 IPR001841 -
Aed1g0775 239 CDD RING-H2_PA-TM-RING 102 145 - -
Aed1g0775 239 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 151 IPR013083 -
Aed1g0775 239 MobiDBLite consensus disorder prediction 215 239 - -
Aed1g0775 239 Pfam Ring finger domain 102 145 IPR001841 -
Aed1g0775 239 PANTHER RING FINGER DOMAIN-CONTAINING 14 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0775 Aed-Chr1 8705810 8706529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0775 5 218 C3H Transcription Factor Family AT2G42360 47.032 3.72e-54 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0775 K19038 - gmx:100780265 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0775 1 8705810 8706529 Aed1g0775 1 8705810 8706529 ECH