Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0753 ATGGACTCCATCGCCGGAGCTCCACCCCCCGCCGACACCACCCCTCCGCCGTCTCGGCCGTCGCCGTTCCCCGGCCGGGAAGACTGCTGGTCGGAGGAAGCGACGTTCACCCTCATCGAGGCCTGGGGCCAGCGCCACCTCGAACTCAACCGCGGAAACCTCCGGCAGCGCCACTGGCAGGAGGTCGCCGACGCCGTCAACGCCCTCCACGGCCACGTCAGCGCCAAGGCCCGCCGCACCGACGTCCAGTGCAAGAACCGCATCGACACGCTTAAAAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCCGATTCCGGCGACTCCGCCACCACCTGGCCGTTCTTCCGCCGCCTCGATTTCCTCATCGGTGACAATTTCCCCGCCAAAAAGCCCTCCCCGCCACCGACTGCCGACCATCGGAGCACCCCTCCGGCCAAGTCCCCGCCGTGGGCCGTCATTCCGGTAGGCCCTCGATCCGGCACCAAGAAGCGACCGGCGCCGGCGAAGCCGGCGGCGCCGTCGCCGGACAGCGTCGCTGACTCATACTTCCGGAGGAATTTCTCTGTGTTCGCCGCGGCCGCGGCCGCGGCGGCGGAGGCCGACAGCGAGAATTCGAATGGGTCTAAATGGAGCAGTGGAAGTGAGAAAGGGACGATGATGAAGAAGAAAAGGGGAAGAGGGGATTGGGAAATTGGGTACAGAGAGATGGCAGAGGCGTTGGAGAGGTTTGGAGAGATTTATGAGAGAGTTGAAGAAGCGAAACAGAGGCAAATGGTTGAGTTGGAGAAACAGAGGATGCAGTTCGCTAAGGATTTGGAAACACAGAGAATGAAACTCTTCATGGAAACGCAGCTTCACTTGCAAAAAATCAACCGCTCCAAACGTTCTTCTGCTTCTGAGCATGATGATGATAGATACACTTTTGCTATGAAACTTTCTTGA 942 0.5966 MDSIAGAPPPADTTPPPSRPSPFPGREDCWSEEATFTLIEAWGQRHLELNRGNLRQRHWQEVADAVNALHGHVSAKARRTDVQCKNRIDTLKKKYKIEKARVSDSGDSATTWPFFRRLDFLIGDNFPAKKPSPPPTADHRSTPPAKSPPWAVIPVGPRSGTKKRPAPAKPAAPSPDSVADSYFRRNFSVFAAAAAAAAEADSENSNGSKWSSGSEKGTMMKKKRGRGDWEIGYREMAEALERFGEIYERVEEAKQRQMVELEKQRMQFAKDLETQRMKLFMETQLHLQKINRSKRSSASEHDDDRYTFAMKLS 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0753 313 Coils Coil 236 267 - -
Aed1g0753 313 MobiDBLite consensus disorder prediction 291 313 - -
Aed1g0753 313 MobiDBLite consensus disorder prediction 9 23 - -
Aed1g0753 313 Gene3D - 30 97 - -
Aed1g0753 313 MobiDBLite consensus disorder prediction 293 313 - -
Aed1g0753 313 SMART 118neu2 37 128 IPR006578 -
Aed1g0753 313 Pfam Myb/SANT-like DNA-binding domain 27 120 IPR044822 -
Aed1g0753 313 MobiDBLite consensus disorder prediction 1 27 - -
Aed1g0753 313 MobiDBLite consensus disorder prediction 126 177 - -
Aed1g0753 313 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 2 300 - -
Aed1g0753 313 MobiDBLite consensus disorder prediction 198 225 - -
Aed1g0753 313 MobiDBLite consensus disorder prediction 201 215 - -
Aed1g0753 313 MobiDBLite consensus disorder prediction 128 151 - -
Aed1g0753 313 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 2 300 IPR044823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0753 Aed-Chr1 8549951 8552045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0753 233 290 Trihelix Transcription Factor Family AT3G14180 51.724 1.82e-14 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aed1g0753 Myb_DNA-bind_4 1.4e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0753 - - gmx:100784918 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0753 1 8549951 8552045 Aed1g0753 1 8549951 8552045 ECH