Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0752 ATGGAGGAGACACGAGAAGATGCAGGGCCGGCAGAGCAAGGGCCATCTAATGTGTCGTGGTGGCCTTCGGATTTTGTTGAAAAATTTGGATCTGTTTCTTTGGGTTCTCAAGACGAGACCTTAAGTAATAATGAATCTCCTCGACATTTTGACAAAGATGTTTTGTCTTCTCAGAAAGCATCACAAACTCTCTGGCGCACTGGAATGCTTTCAGAACCAATACCAAATGGTTTTTATTCAGTCATTCCGGAGAAAAGACTCAAGGAGCTTTTTGATAGTATCCCTACCTTGGACGAGCTTCATGCTCTGGGTGGAGAGGGTTTTAAGGCTGATATCATTCTTGTGGATTCAGAGAAAGATAAAAAGCTATCCATGTTAAAGCAATTGATCGTGGCATTAGTTAGAGGATTAAACTCAAATCCAGCTGCCATAATTAAGAAGATAGCTGGATTAGTTTCTGATTTTTGTAAGCGTCCCAATGTGGAAAGTCCAGCAAAAGCTGCACTAGATGAAACCTCTCACATGTTTGAGAATCGAGGAGTCCAGATGCTGGGGCAAATAAAGCATGGTTCTTGCCGTCCTCGAGCTATCTTATTTAAAGTTTTAGCTGATACTGTTGGTCTTGAAAGTAGGCTCATGGTGGGCTTGCCAAATGATGGAGTTATTGAATGTCAAGACTCGTACAAGCATATGTCTGTTATAGTAGTATTAAATTCTGTGGAAATGCTGGTTGATCTTATGCGATTTCCGGGACAATTGTTACCACGATCAGCCAAGGCAGTTTTTATGACTCACATTTCTGCAGGAGAGAGTGATTCAGCAGAAAATGATTCTTGTGATTCACCATTAGAACCAAACAGTCCATTATTTGGGGTTTCAGAGAGGTTAGATCCCAACAGTGCTGAGAAGGAGGAAAACCTCCAATTCCATAGAAGATTTGAAGCATCTTCAAATTTATCAGGCCTTTCCTTGAGAAATATGATGTTACGATCAAATAGCAGTGTGAGTTTGTCTCATACTGAACCCAACATTGCCACTGCATTTGGTCGGCGTAGTCGGAGAAAGGTCATTGCTGAACAGAGGACAGCTAGTTCAAGTCCAGAACATCCATCATTTAGAGCACGTGGACGGTCCATGCTTAGTGGTGATAGGACAACATTTAGAGATTTTGCTGATGATCAAGCTACATCAAGAGCCAGCTATAGGTCAGACGGTACGTCCTCGTCAGAAGCTCGTCGGATACGAAGAAGAAGCATCAGCATTACACCAGAGATTGGAGATGATATCGTAAGTTGTTTGAAATACTGCGATAACCCAGGATCTCTTCACTGTAGGGCTGTACGGGCAATGAATGAAACTCTGAAGCAAAATCGTCTCTTGAAAGAACGAGGGGATGATAACTCATTCTCCCATTCTCTAAACAATAGTAGTAATGATGCAAATCTTCAGAAAAATGTACGTCTGCATTATTTTGGATGTCCTGCATCAGATTTGCATATGGCTTCCAACTCCAGCATGTTAAAAATTTATGGTTGTATTGAAGTGTCAAATTTCCATCTTGGTGGTCATGATGAAAGATCTGCCCTATATTCTCTTCAGCATGACCAGGGAACTTCACAAAAGGCTATGTCGTTACCATCTTCACCACATGATTATAGAGGCCAGGCTTCTGAGAGAAGTGGGCCATCTTTACCACATGAATTGGAGTCAACATGGAATAAAGTATTGGAATCTCCAATGTTCAATAATAAACCTCTGTTACCATATGAAAAATGGAATATTGACTTCTCCGAATTGACTGTTGGAACTCGCGTAGGGATTGGTTTCTTTGGAGAAGTTTTCCGTGGCATATGGCATGGTACAGATGTTGCAATCAAGGTTTTTCTAGAGCAAGATTTAACTGCTGAAAATATGGAAGATTTTTGCAATGAGATATCTATTCTGAGCCGGCTCCGACATCCTAATGTTATCTTGTTTCTCGGTGCGTGCACAAAGCCTCCACGCTTGTCAATGGTTACAGAATATATGGAGTTGGGATCGTTGTATTACTTGATACATTTGAGCGGTCAAAAGAAAAAGCTTAATTGGCGGAGAAGACTTAGGATGTTGCGTGACATATGCAAGGGTTTGATGTGCATACATCGAATGAAAGTTGTTCACCGTGATATGAAAAGTGCAAATTGTCTAGTGAATAAGCATTGGACCGTGAAAATATGTGATTTTGGGCTTTCAAGAATAATGACTGATCCTCCTATGAGAGATTCTTCCTCAGCTGGAACTCCAGAATGGATGGCTCCTGAGCTTATTCGAAATGAACCATTCACAGAAAAATGTGATATCTTTAGCCTGGGGGTGTTAATGTGGGAACTCTGCACCTTGAACAGACCATGGGAAGGAGTACCACCTGAGAGGGTGGTTTATTCCGTTGCGCACGAGGGTTCCAGATTGGAGATACCAGAAGGCCCTTTAGGAAGGCTGATTTCAGATTGTTGGGCAGAATCTCATGAACGGCCAAGTTGTGAGGAGATTCTTTCTCGTTTGGTGGACATCGAGTACTCCTTGTGCTGA 2568 0.419 MEETREDAGPAEQGPSNVSWWPSDFVEKFGSVSLGSQDETLSNNESPRHFDKDVLSSQKASQTLWRTGMLSEPIPNGFYSVIPEKRLKELFDSIPTLDELHALGGEGFKADIILVDSEKDKKLSMLKQLIVALVRGLNSNPAAIIKKIAGLVSDFCKRPNVESPAKAALDETSHMFENRGVQMLGQIKHGSCRPRAILFKVLADTVGLESRLMVGLPNDGVIECQDSYKHMSVIVVLNSVEMLVDLMRFPGQLLPRSAKAVFMTHISAGESDSAENDSCDSPLEPNSPLFGVSERLDPNSAEKEENLQFHRRFEASSNLSGLSLRNMMLRSNSSVSLSHTEPNIATAFGRRSRRKVIAEQRTASSSPEHPSFRARGRSMLSGDRTTFRDFADDQATSRASYRSDGTSSSEARRIRRRSISITPEIGDDIVSCLKYCDNPGSLHCRAVRAMNETLKQNRLLKERGDDNSFSHSLNNSSNDANLQKNVRLHYFGCPASDLHMASNSSMLKIYGCIEVSNFHLGGHDERSALYSLQHDQGTSQKAMSLPSSPHDYRGQASERSGPSLPHELESTWNKVLESPMFNNKPLLPYEKWNIDFSELTVGTRVGIGFFGEVFRGIWHGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMELGSLYYLIHLSGQKKKLNWRRRLRMLRDICKGLMCIHRMKVVHRDMKSANCLVNKHWTVKICDFGLSRIMTDPPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVLMWELCTLNRPWEGVPPERVVYSVAHEGSRLEIPEGPLGRLISDCWAESHERPSCEEILSRLVDIEYSLC 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0752 855 CDD STKc_MAP3K-like 605 847 - -
Aed1g0752 855 MobiDBLite consensus disorder prediction 358 415 - -
Aed1g0752 855 Pfam Protein tyrosine and serine/threonine kinase 600 847 IPR001245 GO:0004672|GO:0006468
Aed1g0752 855 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 27 487 - -
Aed1g0752 855 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 514 853 - -
Aed1g0752 855 SMART serkin_6 599 848 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g0752 855 MobiDBLite consensus disorder prediction 1 20 - -
Aed1g0752 855 Gene3D Phosphorylase Kinase; domain 1 592 677 - -
Aed1g0752 855 SUPERFAMILY Protein kinase-like (PK-like) 571 847 IPR011009 -
Aed1g0752 855 ProSitePatterns Protein kinases ATP-binding region signature. 605 626 IPR017441 GO:0005524
Aed1g0752 855 ProSiteProfiles Protein kinase domain profile. 599 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g0752 855 Gene3D Transferase(Phosphotransferase) domain 1 678 853 - -
Aed1g0752 855 MobiDBLite consensus disorder prediction 271 295 - -
Aed1g0752 855 Pfam Ethylene-responsive protein kinase Le-CTR1 57 253 - -
Aed1g0752 855 MobiDBLite consensus disorder prediction 392 407 - -
Aed1g0752 855 MobiDBLite consensus disorder prediction 538 554 - -
Aed1g0752 855 MobiDBLite consensus disorder prediction 538 564 - -
Aed1g0752 855 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 27 487 - -
Aed1g0752 855 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 514 853 - -
Aed1g0752 855 ProSitePatterns Serine/Threonine protein kinases active-site signature. 718 730 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0752 Aed-Chr1 8533224 8549799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0752 1 855 MAP Kinase Kinase Kinase AT3G58640 68.293 0.0 1168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Aed1g0752 PK_Tyr_Ser-Thr 1.8e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0752 - - gmx:100803469 1481.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0752 1 8533224 8549799 Aed1g0752 1 8533224 8549799 ECH
Aed1g0752 1 8533224 8549799 Aed5g0945 5 7343907 7357363 PCT