Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0748 ATGGATGAGAGAATTTGTGTATCTGAAGAAGATCATAAGAGTGAAAGTAGCAAACCCTCTTCTACAAGTCTTAGAAGAAAACGTTCATTTTTCGATTTGAATGAAGAAGCTGTGGATGGTGGAGATGATAACAGCAGTACCAGTGATGATGATGATGAAGATGATGGCCACATGATCAATAGCAATGACATTTCATCACAAGAAGGTAATAACTCTAGTGAAGAAGGGAAAGAGCGTGCATCTTCTACGGTTAGGCAATATGTGAGATCCAAAATGCCAAGGCTTCGTTGGACTCCTGATCTTCATTTATCTTTTGTGCATGCTGTTGAGAGGCTTGGTGGACAAGAAAGAGCAACGCCCAAGTTGGTTCTCCAGTTGATGAATGTGAGAGGACTTAGCATTGCACATGTAAAGAGCCATTTGCAGATGTATCGAAGTAAAAAGCTTGATGAGTCTGGCGAAGTTTTATCCCACAATAGGGCAATGCAAGGAAGACACAGTATTTTTGGTATGTACGGAAGAGTTAATGCCCCACGACACTTTGGGAACCATGTGCCATCGTCTCTTCTTATGGAACAAAAACCTTATAATGAAATCAGTGCTCATAGCTCTTCAAGATTACACCCGACAGGACTTTTCAATAGTCACATGATGATAAGATCAAGTTCAATGTCGGACAAAGATTTATATAATTATCAGTGTCAACGTAGTTTCTGCAGTCCTAACTTCACTGGCCACGCCAAGTTTGATGCTGAGGTTCATGATGTGAAAAATCGAATGCCAGAATTTATAAATCAGGTTCAAGCGTGGAAACAAGGTCACATCAAAGATGAATTAGAGAGATTGAACAAGAAGAGAGGATCCCCGAGTTTCTTGGAGCTAAAACTAAGTCAAGATTCAAGAAATATTGTTAGAGTTGATCAGCAGATGAAGAAAGACCCAGAAAGTGAACAAGAAATTAATACGAGTCTCTCTCTTTCGTTGTTCACAGCTTCGTCCTCATCTTCAGAATCATCACCATCACAAGCACAATGTAGTGATCAAAAGCATAGCCATAATGTTGAGAGTTTTTGTTTTCAAAATTATGCACTTGGGAGTCGTTTGGGCTGA 1110 0.3982 MDERICVSEEDHKSESSKPSSTSLRRKRSFFDLNEEAVDGGDDNSSTSDDDDEDDGHMINSNDISSQEGNNSSEEGKERASSTVRQYVRSKMPRLRWTPDLHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGEVLSHNRAMQGRHSIFGMYGRVNAPRHFGNHVPSSLLMEQKPYNEISAHSSSRLHPTGLFNSHMMIRSSSMSDKDLYNYQCQRSFCSPNFTGHAKFDAEVHDVKNRMPEFINQVQAWKQGHIKDELERLNKKRGSPSFLELKLSQDSRNIVRVDQQMKKDPESEQEINTSLSLSLFTASSSSSESSPSQAQCSDQKHSHNVESFCFQNYALGSRLG 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0748 369 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 93 148 IPR006447 GO:0003677
Aed1g0748 369 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 26 350 - -
Aed1g0748 369 MobiDBLite consensus disorder prediction 36 57 - -
Aed1g0748 369 Gene3D - 92 149 - -
Aed1g0748 369 MobiDBLite consensus disorder prediction 1 85 - -
Aed1g0748 369 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 26 350 IPR044848 GO:0003700
Aed1g0748 369 MobiDBLite consensus disorder prediction 1 22 - -
Aed1g0748 369 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 89 149 IPR017930 -
Aed1g0748 369 Pfam Myb-like DNA-binding domain 95 145 IPR001005 -
Aed1g0748 369 SUPERFAMILY Homeodomain-like 91 147 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0748 Aed-Chr1 8516373 8518216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0748 81 152 G2-like Transcription Factor Family AT2G42660 79.167 2.22e-35 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aed1g0748 Myb_DNA-binding 9.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0748 - - gmx:102668520 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0748 1 8516373 8518216 Aed1g0748 1 8516373 8518216 ECH