Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0738 ATGGCTATGGGTGATTCAGGAATGCATGGTAGTCAGATGAGAGTGGATCATGATCTGATTGATCTCGACGAGATTTACAAGAATGATACATCACAACACAATAATGGTATTGGATTCTCGACATTTTCTTCTCAACAGTATGAAGATGTTAATAATGCTACTTTATGGGACTCTAGTTCCACAGACGTGATTTTGAATGCTGGACTCAACATGCAACGAGCGAGTGACCTTCTCTTCGGGTTCTCAATCTTTACTGAGCCAATAAAAACCGAAATCACCCAGCTTGCGCGTTCAGCCATGGATGAGTTGTTGAAGATAGGCACTGCAGGGCAACCATTATGGCAGCCCCAACCAAGGGACAGACATGACATTTTAAATAAAATGGAGTATTTGGGGCAATTTGGTCAGGTTGATTCAACCCTAAGGGATCTTGTTAAGCTGATTGAAGTTGGAGAGACTCAAATTAATTTACCAAGCTTTGACACATATCAAACTGAGGAGCCAGCATCAAAGGCAACTCCTACAGTAGCTCTACAAACTGAAGCTTCACGAGATATGGGGTTTATTAACATGTCCCCAATCACCATTGTTGAATTACTAATGGATGTGAATCAATGGTCGAGTGCATTCTACAATATTGTCTCGAAAGCAACCAACGTTGGAACTTTATTAGGACTGGAGGGAAGCTATGATGACAAATTGCACGTGATAAGCACAGAACTTCATTTACCTACTGCTACTGTACCGACTAGAGAGTGTTATATTGGAAGGTACAGCAAGCAGCTCTCTCATAACATATGGGGAGTTGTGGATATATCATTGGAGAAGTTTCTTCCCTCTCCAACTAGCAATTTCTTGAAAAGGCCATCAGGATGTTTAATTAGTGGAATGCCTAACGGACACTCTAAGGTTGTATGGGTTGAGCATGTAGAAGCAGATCATAGTCATTTGGACAATTATTTCCGGCCTCTAGTCTCATCCACTCTAGCTTTTGGTGCAACCCGTTGGCTAAGTTCCTTAAACAGATATAGTGAGTGGTTACAGACTCTAAATGCAACAACAATTGTTGCAGATGAAGGAGTTTTTATACCCCAAATTGGAAGGACAAGTTTCTTGAAACTGGCGGATAGAATGATGAAAAACTTTTGTGCAAATGTCAGTGGTACCGCAGACAATCCATGGATGAATACGACTACTTTTCTTGGTAATGCAGATGTGAGAATCATGGTCAAGAATAATACACAAGATACTGCAATGCCTCTTGGTACATCCATGGTTTTCACTACTTCTCTTTCCCTAGAAGTCTCCCCAAATCGATTATTCAACTTCCTACGTCACGAGAATTCCAGAACCAAGTGGGATTCGCTTTCACGTAGACTTGTTATTCGAGAATTCGCATCCATGCTCAAGGGAGAAAATCCAGGGAATCGTGTTTCCTTGATGCGTGCAACTGGATCAAATCCTGACAGAGTGATGATTCTGCCATCAGGGTTTAGTATACTTCCTGTGAGGTTGCTGCAAGGAGATGAAGATAGAGGCACTGGAACTCTTCTAACTGTTGCATTCCACATAGTTGAAAGTGCCACAAATAAGCAATTTATCCCTCCTGAATCAATCCAAACCATATACAAAGTCATCACAGATACTGTTGCCTCTATAAAGGACATAGTGCTCTATCCTCATCATCGCAACAGTTGGATGGAGGATTGA 1710 0.4146 MAMGDSGMHGSQMRVDHDLIDLDEIYKNDTSQHNNGIGFSTFSSQQYEDVNNATLWDSSSTDVILNAGLNMQRASDLLFGFSIFTEPIKTEITQLARSAMDELLKIGTAGQPLWQPQPRDRHDILNKMEYLGQFGQVDSTLRDLVKLIEVGETQINLPSFDTYQTEEPASKATPTVALQTEASRDMGFINMSPITIVELLMDVNQWSSAFYNIVSKATNVGTLLGLEGSYDDKLHVISTELHLPTATVPTRECYIGRYSKQLSHNIWGVVDISLEKFLPSPTSNFLKRPSGCLISGMPNGHSKVVWVEHVEADHSHLDNYFRPLVSSTLAFGATRWLSSLNRYSEWLQTLNATTIVADEGVFIPQIGRTSFLKLADRMMKNFCANVSGTADNPWMNTTTFLGNADVRIMVKNNTQDTAMPLGTSMVFTTSLSLEVSPNRLFNFLRHENSRTKWDSLSRRLVIREFASMLKGENPGNRVSLMRATGSNPDRVMILPSGFSILPVRLLQGDEDRGTGTLLTVAFHIVESATNKQFIPPESIQTIYKVITDTVASIKDIVLYPHHRNSWMED 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0738 569 SMART START_1 135 346 IPR002913 GO:0008289
Aed1g0738 569 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 483 559 IPR042160 -
Aed1g0738 569 SUPERFAMILY Bet v1-like 88 347 - -
Aed1g0738 569 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 72 483 IPR042160 -
Aed1g0738 569 CDD START_ArGLABRA2_like 89 345 - -
Aed1g0738 569 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN ROC2 483 559 - -
Aed1g0738 569 Pfam START domain 162 344 IPR002913 GO:0008289
Aed1g0738 569 SUPERFAMILY Bet v1-like 366 524 - -
Aed1g0738 569 ProSiteProfiles START domain profile. 85 349 IPR002913 GO:0008289
Aed1g0738 569 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN ROC2 72 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0738 Aed-Chr1 8427880 8432811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0738 71 557 Homeobox Transcription Factor Family AT4G04890 35.305 1.45e-95 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0738 K09338 - gmx:102662817 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0738 1 8427880 8432811 Aed1g0738 1 8427880 8432811 ECH