Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0733 ATGAAAACTATCTCATTAAAGCACATGCCTTCCTTGTACCCAACGAAAACAACAACAACATTAACAATCTTTTTGTTTCTTTTCCTCAGCTTCCACGTTGGCCGCGGCCAAAATGACTTTGAAAAGATAAAGTTGTTGTCCTCGCCACCACCTCCGCCGCACGCGACCGAGCTGGACGCCTGCAATGGCGTGTTCCTCACGTACGAGCTCCTGGGGCGCGTGAAGGAGTACCCGCACGTGACGAACGCATCGAGGCAGGCGTGGGCTTTCAAGGCGGAGGCGTCCCTGACTAACGTCGGGGACGAGGAGGTGCAGGGGTGGAAGATGTACGTCGGGTTCCAGCATCGCGAGATGCTGGTGTCCACCGACGGCGCCGTGCTCATCGACGCCGGGGACTTTCCGGCGGAGGTGGGGAACGGGACCACCATGTCGGGGACTGCCGTGACGGACCTGAAAACCGCCATAGAGACAGCCGGGGATATTAATCAGATGAGTGTGAAGATTGACATAACTGGGACGCAGTTTGGGTTGGGTGCTGGGGCTTCGCCAATGCCTAAAACTATTCGTCTTCAGAATGATGGCTTCAAATGCCCTGCACCTACTCATCGAGCCAAGAGCATGTTCGTATGCTGCAGAAAGGACCCAAAAGTGAAAGCCAAGGTAGTGAAGAAAACAAAGTACCCACCACGTCGCAATGGAGACCTAATCATAGCATTTGACGTGCTCCAAGCCTTCACCAACAACTACTACGCTCAAATCACAATAGACAACAACCACCCACTGGGTCGTCTCGACCACTGGAACTTAACATGGGAGTGGCAAAGAGGAGAGTTCATTTACTCCATGAAAGGTGCTTTTCCTCGCAGAAAGGACCCTTCCGAGTGCCTCTACGGCGTCGCAGGAAGGTCCTACAGAGACTTGGACTTCTCGCAGGTCGCCACGTGTCAGAAGAAGCCAACAATCTCGGACCTTCCGGCGGAGAGAGCAGAAGATGAGAAGATCGGGAAGCTCCCCTGGTGCTGCAGAAACGGCACCGTTTTGCCTCCAATCATGGACAGGAACAAAGCTAGGTCAATGTTTCAGATGCAAGTGTTTAAAATGCCACCAGACACTGATAACAGAACTTCTCTGACTCCACCCATTAAGTGGAACATTGACGGTGTTATTAACCCGGAGTATAAATGCAGTGCACCGGTTAGGGTTGACCCTCAGGTCTTCCCTGATCCCAGTGGGCTTAGGGCTATTTCCACAGCTGTCGCGAGTTGGCAAATAGTTTGCAACATCACCAGGCCCAAGCCCCAGCAGGCCCGCTGCTGCGTCTCGTTCTCGGCTTTCTACAATGAATCGGCCATTCCTTGCAACACGTGCGCGTGCGGCTGTGACGACACGAGGAAGTGCAACTCTATGGCTTCCCCGATGCTTATTCCACCGGATGTTCTTCTCGTGCCGTTTGTTAACAGGACCTTGAAGGCACGTGCGTGGGCCAAGCTCAAGCACCTGCACGTGCCTGTGAAACTCCCTTGTGCTGACAACTGCCCCGTCAGCATCAACTGGCACGTGAGTTCTGATCACAAGGACGGATGGACGGCCAGGATCACGCTCTTCAACTGGGAGGACTACTCCTTTGACGATTGGTTCACGGCGGTTCAGCTGAGGAGGACTTTCGACGATTTTGAGGATGTTTATTCCTTCAACGGTACGAGGATTCCTGGTCTGAAAACGGTTTTCTTCCAAGGGCTGAAGGATATGAATTACTTGGCGGGAAGAACCAATGGAACACATACTTATGACCCTAAGGTGCCAGGGAAACAACAATCTGTTCTTTCCTTCAGCAAGAAGAATATAGAAAACTTTGATGTTACACGTGATGGGTTCCCCACCAAGGTTTTCTTCAATGGAATGGAGTGTGCACTTCCTCCAACTAGACCTCCCAAAAGTTCAGGCCACAAATCTTCTTCTTCCATCAGTACTGTCATTGCACTCATTTTCACTGCTTTTCTGACTTTCTTGATCATCTAA 2019 0.5166 MKTISLKHMPSLYPTKTTTTLTIFLFLFLSFHVGRGQNDFEKIKLLSSPPPPPHATELDACNGVFLTYELLGRVKEYPHVTNASRQAWAFKAEASLTNVGDEEVQGWKMYVGFQHREMLVSTDGAVLIDAGDFPAEVGNGTTMSGTAVTDLKTAIETAGDINQMSVKIDITGTQFGLGAGASPMPKTIRLQNDGFKCPAPTHRAKSMFVCCRKDPKVKAKVVKKTKYPPRRNGDLIIAFDVLQAFTNNYYAQITIDNNHPLGRLDHWNLTWEWQRGEFIYSMKGAFPRRKDPSECLYGVAGRSYRDLDFSQVATCQKKPTISDLPAERAEDEKIGKLPWCCRNGTVLPPIMDRNKARSMFQMQVFKMPPDTDNRTSLTPPIKWNIDGVINPEYKCSAPVRVDPQVFPDPSGLRAISTAVASWQIVCNITRPKPQQARCCVSFSAFYNESAIPCNTCACGCDDTRKCNSMASPMLIPPDVLLVPFVNRTLKARAWAKLKHLHVPVKLPCADNCPVSINWHVSSDHKDGWTARITLFNWEDYSFDDWFTAVQLRRTFDDFEDVYSFNGTRIPGLKTVFFQGLKDMNYLAGRTNGTHTYDPKVPGKQQSVLSFSKKNIENFDVTRDGFPTKVFFNGMECALPPTRPPKSSGHKSSSSISTVIALIFTAFLTFLII 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0733 672 Pfam COBRA-like protein 249 429 IPR006918 GO:0010215|GO:0031225
Aed1g0733 672 PANTHER COBRA-LIKE PROTEIN 10 18 671 - -
Aed1g0733 672 PANTHER COBRA-LIKE PROTEIN 7 18 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0733 Aed-Chr1 8398371 8404509 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0733 1 672 COBRA Gene Family AT3G20580 56.721 0.0 791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0733 - - gmx:100789175 1157.9