Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0723 ATGAATGGATGCTTCAAGTCTGATGCAACAAGTGACATGGATGTCATATATAGGAAAAATGATAAGTTTAGGGAAGGGATGAAGAAGAACTCAAATGTTGAAAAGCATGGCCATGGAAACTGGTCTTCAGTTACTTCCAAAGCAGGTAAACAACTTTCATGTGCCATCTATTCTATTTTTTCAAATCATTTTATGAGTCTACTTCGTGTTAGAGCCTCGAGGAATCGAGTTTTACTGTATATTTTTTTCATTTATGTTGCATTGCATACATGTGCATATATAGGTCTTCAAAGATATAGAAAGAGTTGCAGACTGAGGTGGATTAACAACCTCAAACCAGAGATAAAACGAGGAAACTTCAGCTTTGTAGAAGATCTCACCATTGTTCAACTTCATGCTCCTTTTGGAAACAAATGGTTAATCATAGCATCTCATTTGTCGAAGAAAACAAACAATGAGATCATGAATAATTGGAACACCAACGTTAAGAAAAGGTTCATCAGAATGGGCATGCATTCATTTATTCAACCAAAAGGCAACACCTTTGAAGCCTATGGTGGTCATCAATCGAAGGAAGTTGACAATAATATGAGCAACATGGCACAATGGGAGAGTGCTCAATTTGAAGTTCTAACTAGAGAATCCATGCTGCAAGTTGGATTTAGCTCCTTCTTTCTTCCAGTTTATTAA 690 0.3652 MNGCFKSDATSDMDVIYRKNDKFREGMKKNSNVEKHGHGNWSSVTSKAGKQLSCAIYSIFSNHFMSLLRVRASRNRVLLYIFFIYVALHTCAYIGLQRYRKSCRLRWINNLKPEIKRGNFSFVEDLTIVQLHAPFGNKWLIIASHLSKKTNNEIMNNWNTNVKKRFIRMGMHSFIQPKGNTFEAYGGHQSKEVDNNMSNMAQWESAQFEVLTRESMLQVGFSSFFLPVY 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0723 229 CDD SANT 119 162 IPR001005 -
Aed1g0723 229 SMART sant 116 164 IPR001005 -
Aed1g0723 229 ProSiteProfiles Myb-like domain profile. 112 162 IPR001005 -
Aed1g0723 229 Pfam Myb-like DNA-binding domain 117 160 IPR001005 -
Aed1g0723 229 PANTHER TRANSCRIPTION FACTOR MYB51 32 211 - -
Aed1g0723 229 SUPERFAMILY Homeodomain-like 97 169 IPR009057 -
Aed1g0723 229 Gene3D - 119 200 - -
Aed1g0723 229 Gene3D - 30 116 - -
Aed1g0723 229 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 112 166 IPR017930 -
Aed1g0723 229 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 32 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0723 Aed-Chr1 8366128 8367034 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0723 33 217 MYB Transcription Factor Family AT3G01140 39.894 6.92e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed1g0723 Myb_DNA-binding 5.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0723 K09422 - gmx:100792464 159.073