Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0710 GGATCCACCCTCTTCTATCTTCATGCTCTTTGTTTTGTGGGGGATGAGCTTCTCCTAGACAAAGACCAACAAGCTGGTGGGGGACAGAGAGAAGAAGAGATGGTGGGAACTCCAATTGGAACTCCAATTAACGGAAGAACAAGGCCAGCTTTTGGTGTTGTTAATGGTGGCCATGATCTTGGCCCCAGTAGTGCTCCACCAAGCAATGCTGGCTCAGATTATGGCTTTATTGAGTTCACAAGAGAGGATGTGGAGGCCTTGCTGAATGAAAAGGCCAAAAGGAAGGACAGATTTAACTATAAGGTTTGCATCAGGTGGTTCCAAGACCTTGAGCTTAGCTACTCACTAGACCAAGAGAAGCTGAAGAGTTCATTGGAATTGGCCCAGCAAAAATGCGCGGAAATAGAGCAGCTACTCAAAATCAAGGAAGAAGAGCTAAACTCAATAATTGTGGAAATGAGAAGGAATTGCACTTCTTTACAAGAGAAATTAGTGAAGGAAGAATCAGAAAAAACAGCAGCAGCAGAATCTCTTGTTAAGGAGAGAGAGGCCAGGCTTAACTTTGAGAGGTCACAGAATACACTACAGGAGGATCTCGGGCGAGCACAACGAGAACTCCAGAGTGCAAATCAGAAGATATCATCACTCAATGACATGTACAAGCGGTTACAGGATTACATAACAAGCTTGCAGCAGTACAATGGAAAACTCCATTCAGAGCTTTCTACAGTTGAAAATGAACTTAAGCGTGTAGAGAAAGAGAAGGCTACTGTAGTGGAGACCCTTACCATGTTAAAGGGTCAGCTTACTTTGTCTATGGCTTCTCAAGAAGAGGCCACAAAACAGAAGGATGCCTTGGCTAGTGAAGTTACATCTCTTCGAGCAGAGTTGCAACAAGTGAGAGATGACCGAGACCGCCAATTATCTCAAGTGCAAACTTTAACATCTGAATTAGAGAAGTCTAAAGATTCTACAGAAAAGTCTTGCTCTGAACTGAGCAGCTTGACTTTAAGAACAAATGAACTGGAGGCAAAATGTGCTTTGCAAGATGAGCGGATAAAGGTACTACAAGAGCAGCTAACTACTGCTGAGGAGAAACTGCAGGTCTGTGACGTATCTGCTAGTGAGACAAGAATAGAATTTGAAGGGCAACAAAAACTTGTACATGAGATGCAAAGACGTTTGGAAGATGCAGAATATAAAGTTATAGAAGGGGAGAAGCTGAGGAAAGAATTACACAATACTATTTTGGAACTAAAAGGGAACATCCGCGTGTTCTGTAGAGTGCGTCCTTTGTTACCTGATGAAGGTTCTAGCACAGAAGGAAAGCTTATATCTTATCCCACATCAATGGAAGCTTCTGGACGGGGCATTGAATTGACGCAAACTGGCCAAAAGCATTCTTTCACATATGATAAAGTTTTTGCACCTGATGCATCACAAGAAGAAGTTTTTATCGAAATTTCACAGCTTGTGCAAAGTGCTCTTGATGGTTATAAGGTTTGCATTTTTGCCTATGGTCAGACAGGGTCAGGGAAAACTTATACAATGATGGGAAGGCCTGGACATCCAGAAGAAAAGGGCTTGATCCCTCGTTCACTAGAACAAATATTTCAAGCAAAACAGTCTCAGCAACCCCAAGGCTGGAAATATGAAATGCAGGTGTCAATGTTGGAAATATACAATGAAACCATTCGAGATCTGCTAGCTACAAATAAGTCATCATCGGATGGAACACCAACACGTGTGGAAAATGGTACTCCTGGGAAGCAATACACAATCAAACATGATGCCAATGGAAATACACACGTTTCTGATCTCACGGTAGTGGATGTTCAGAGTGTAAAAGAGGTTGCATTTCTTTTAAATCAAGCTGCAAATAGCAGATCCGTGGGAAAAACTCAGATGAATGAACAATCTTCTAGAAGTCATTTTGTCTTCACTCTTCGAATATATGGTGTCAATGAGAGCACTGACCAACAAGTACAAGGTATTCTAAATCTCATTGATCTTGCTGGGAGTGAGCGTCTTTCAAGGAGCGGGTCAACCGGGGACCGATTGAAAGAAACTCAAGCAATAAATAAAAGTCTGTCATCCTTAAGTGATGTCATATTTGCCTTGGCCAAGAAGGAGGATCATATCCCATTCAGGAACTCAAAGCTTACATACCTCCTTCAGCCTTGTCTAGGTGGGGACTCAAAGACATTAATGTTTGTTAACATATCTCCTGACCAAGCTTCAGCTGGAGAGTCACTATGCTCACTCCGGTTTGCATCAAGAGTCAATGCTTGTGAAATTGGGACACCACGCCGTCACACCAATGGACGTCCTATAGAATCTCGCTTGACCTATTTCTAA 2358 0.4245 GSTLFYLHALCFVGDELLLDKDQQAGGGQREEEMVGTPIGTPINGRTRPAFGVVNGGHDLGPSSAPPSNAGSDYGFIEFTREDVEALLNEKAKRKDRFNYKVCIRWFQDLELSYSLDQEKLKSSLELAQQKCAEIEQLLKIKEEELNSIIVEMRRNCTSLQEKLVKEESEKTAAAESLVKEREARLNFERSQNTLQEDLGRAQRELQSANQKISSLNDMYKRLQDYITSLQQYNGKLHSELSTVENELKRVEKEKATVVETLTMLKGQLTLSMASQEEATKQKDALASEVTSLRAELQQVRDDRDRQLSQVQTLTSELEKSKDSTEKSCSELSSLTLRTNELEAKCALQDERIKVLQEQLTTAEEKLQVCDVSASETRIEFEGQQKLVHEMQRRLEDAEYKVIEGEKLRKELHNTILELKGNIRVFCRVRPLLPDEGSSTEGKLISYPTSMEASGRGIELTQTGQKHSFTYDKVFAPDASQEEVFIEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPEEKGLIPRSLEQIFQAKQSQQPQGWKYEMQVSMLEIYNETIRDLLATNKSSSDGTPTRVENGTPGKQYTIKHDANGNTHVSDLTVVDVQSVKEVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGILNLIDLAGSERLSRSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHIPFRNSKLTYLLQPCLGGDSKTLMFVNISPDQASAGESLCSLRFASRVNACEIGTPRRHTNGRPIESRLTYF 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0710 785 Coils Coil 77 97 - -
Aed1g0710 785 Pfam Kinesin motor domain 428 762 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed1g0710 785 Coils Coil 276 317 - -
Aed1g0710 785 Coils Coil 192 226 - -
Aed1g0710 785 Coils Coil 118 170 - -
Aed1g0710 785 PANTHER KINESIN-LIKE PROTEIN KLP-3 31 784 - -
Aed1g0710 785 ProSiteProfiles Kinesin motor domain profile. 422 764 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed1g0710 785 Coils Coil 234 261 - -
Aed1g0710 785 SUPERFAMILY Tropomyosin 273 421 - -
Aed1g0710 785 SMART kinesin_4 420 772 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed1g0710 785 PANTHER KINESIN-LIKE PROTEIN 31 784 - -
Aed1g0710 785 PRINTS Kinesin heavy chain signature 714 735 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed1g0710 785 PRINTS Kinesin heavy chain signature 665 683 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed1g0710 785 PRINTS Kinesin heavy chain signature 498 519 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed1g0710 785 PRINTS Kinesin heavy chain signature 634 651 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed1g0710 785 CDD KISc_C_terminal 420 766 - -
Aed1g0710 785 Coils Coil 339 366 - -
Aed1g0710 785 Gene3D Kinesin motor domain 366 766 IPR036961 -
Aed1g0710 785 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 382 762 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0710 Aed-Chr1 8268171 8274441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0710 99 776 Calmodulin-binding Proteins AT5G65930 31.186 1.15e-78 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0710 K10405 - gmx:100801196 1366.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0710 1 8268171 8274441 Aed1g0710 1 8268171 8274441 ECH
Aed1g0710 1 8268171 8274441 Aed5g1031 5 8133820 8140224 PCT