Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0703 ATGCCAACTGTGTGGTTCTCTTTGAAAAAGTCTCTACACTGCAAATCAGAGGCATCAGATGTTCATGACCCAAAAACAAGGAAGCAGTTGGCAACAATCTTGACCAAAAGGGGAGGAGGTAGGTCAGGTTGTTCCAGGTCCATAGCAAATCTCAAAGATGTAATCCATGGGAGCAAGAGGCATCTAGAGAAGCCACCAAGTTGCAGCCCAAGATCCATTGGTAGCAGTGACTTCCTCAACCCAATAACACATGAAGTCATCCTCAGCAACTCAAGGTGTGAACTGAAAATCACTGGCTATGGGGTTGGCACTGATGATGGTGCCAATAATAATGGGGGTGGTGCCATAAGTGGTGACTTGAGTACTTTTGTGGGCACTTTAAGGCCTGGCACCCCTGGCCCTGGAGGGCACCCTACAATGCACTACTTCAACCCTTCTTTTAGGACTACTACTTCCACTTCTCCAAGGAAATCTCCTTTCCTTTCATCAGATAAAGAAGGTGTTGGACTTGGACCTCATTCAAATGTGCCACCTTCCACTGTCACTTGCCACAAATGTGGAGAGCAATTTAACAAATGGGAAGCTGCTGAAGCTCATCATCTCTCCAAGCATGCTGTTACTGAACTCGTGGAAGGAGATTCATCAAGAAAAATAGTGGAGATAATATGCAGGACCAGCTGGTTGAAGTCTGAGAACCAATGTGGTAGAATTGAGAGAGTTTTGAAAGTGCATAACATGCAAAAGACTCTGGCAAGGTTTGAGGAGTATAGAGAGTTGGTGAAAACCAAAGCTAGTAAACTCCCCAAGAAGCATCCAAGGTGTCTTGCTGATGGCAATGAACTTTTGAGGTTCTATGGCACCACTGTTGCATGTCCTCTTGGTCTCAGTGGCTCTTCAAGCTTGTGCCAATCTGAAAAGTGCTGTGTTTGTAGAATCATCAGAAATGGGTTTTCTGCCAAGGAGGAGCTCAAGGGTGGAATAGGTGTTTTCACTACTTCCACAAGTGGAAGGGCTTTTGAATCTATTGAGGTTTTTGACCATGACAACACTTCATTGAGAAAAGCACTTGTAGTGTGCAGAGTCATTGCTGGCAGGGTCCATAGACCTCTGGAGAACATTCAGGAAATGGCAGGACAAACAGGCTTTGATTCATTGGCAGGGAAAGTTGGTCTTTATTCAAATATCGAGGAGCTTTATTTGCTCAATGCTAGAGCTCTTCTTCCTTGCTTTGTGGTAATTTGCAAACCATGA 1251 0.4476 MPTVWFSLKKSLHCKSEASDVHDPKTRKQLATILTKRGGGRSGCSRSIANLKDVIHGSKRHLEKPPSCSPRSIGSSDFLNPITHEVILSNSRCELKITGYGVGTDDGANNNGGGAISGDLSTFVGTLRPGTPGPGGHPTMHYFNPSFRTTTSTSPRKSPFLSSDKEGVGLGPHSNVPPSTVTCHKCGEQFNKWEAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENQCGRIERVLKVHNMQKTLARFEEYRELVKTKASKLPKKHPRCLADGNELLRFYGTTVACPLGLSGSSSLCQSEKCCVCRIIRNGFSAKEELKGGIGVFTTSTSGRAFESIEVFDHDNTSLRKALVVCRVIAGRVHRPLENIQEMAGQTGFDSLAGKVGLYSNIEELYLLNARALLPCFVVICKP 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0703 416 Gene3D - 196 415 - -
Aed1g0703 416 SUPERFAMILY ADP-ribosylation 206 415 - -
Aed1g0703 416 PANTHER - 2 416 - -
Aed1g0703 416 MobiDBLite consensus disorder prediction 143 160 - -
Aed1g0703 416 ProSitePatterns Zinc finger C2H2 type domain signature. 183 204 IPR013087 -
Aed1g0703 416 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 416 - -
Aed1g0703 416 MobiDBLite consensus disorder prediction 123 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0703 Aed-Chr1 8230102 8232724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0703 1 416 C2H2 Transcription Factor Family AT5G54630 65.665 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aed1g0703 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0703 - - gmx:100800127 699.123