Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0700 ATGAAAGAGGAGTCAACTGGACTTATCATTGGGATTTCCATAGGTGTTGTGATTGGAGTTGGATTGGCAATTTCTGCATTGTTCTGTCTTAGATATCACCGGAAGCGGTCGCAGATTGGCAATAGCAGTTCCCGGAGGGCGGCTACCATACCAATCCGCGAAAATGGTGCTGATTCTTGCAATATTCTATCAGACTCAACCTTAGCTCCTGAATCACCTGTGAGGTCTGGACGAAATGGCATGTCCTTCTGGCTTGATGGCTTCAAGAAGAGTAGTAGTAACATGGTGTCAGCATCTGGAATACCAGAATATTCATACAAGGATTTGCAAAAGGCAACATATAATTTTACAACACTCATAGGACAAGGTGCATTTGGTCCTGTATATAAAGCTCAGATGTCTACTGGCGAAACTGTTGCAGTTAAAGTTCTTGCAACTAATTCTAAGCAGGGGGAGAAAGAATTTCAGACAGAGGTTATGCTGTTGGGAAGGTTACATCATAGAAATCTGGTCAATTTGGTTGGGTATTGTGCAGAAAAGGGGCAACATATGCTTGTGTATGTCTACATGAGTAAAGGCAGTTTGGCTTCCCACTTGTATAGTGAAGAGAATGGAGCTTTGGGCTGGGATTTGAGGGTTCATATAGCTTTGGATGTAGCAAGAGGCATAGAGTATCTTCATGATGGGGCAGTTCCTCCGGTAATCCATCGAGATATCAAATCTTCCAACATTCTCTTGGACCAGTCTATGCGAGCTAGGGCAGCAATGAACACTGAGGGAAAAGTTGGTTGGGAGGAGATAGTAGATTCTCGGCTTGAGGGAAAATGTGATTTTCAAGAGCTGAATGAAGTGGCAGCACTTGCCTACAAATGCATCAACCGTGCCCCAAAGAAACGCCATTCAATGAGGGACATAGTGCAAGTGTTGACAAGGATCCTTAAATCAAGGCACCAAAAGAACCATCATCATAAAAATTCCCTCTCAGCAGCCACGGCTGATGAAGTTTCCATTGATGTTGATATGCTAGAAACCAAGAGTTCTGTCACTGACCACAGAAGAGAAGAATCTATAGATAGTACTACAGCTGACATTTATGATTTGTAG 1104 0.4312 MKEESTGLIIGISIGVVIGVGLAISALFCLRYHRKRSQIGNSSSRRAATIPIRENGADSCNILSDSTLAPESPVRSGRNGMSFWLDGFKKSSSNMVSASGIPEYSYKDLQKATYNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATNSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSKGSLASHLYSEENGALGWDLRVHIALDVARGIEYLHDGAVPPVIHRDIKSSNILLDQSMRARAAMNTEGKVGWEEIVDSRLEGKCDFQELNEVAALAYKCINRAPKKRHSMRDIVQVLTRILKSRHQKNHHHKNSLSAATADEVSIDVDMLETKSSVTDHRREESIDSTTADIYDL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0700 367 Pfam Protein tyrosine and serine/threonine kinase 116 251 IPR001245 GO:0004672|GO:0006468
Aed1g0700 367 MobiDBLite consensus disorder prediction 345 367 - -
Aed1g0700 367 MobiDBLite consensus disorder prediction 345 360 - -
Aed1g0700 367 Gene3D Transferase(Phosphotransferase) domain 1 190 254 - -
Aed1g0700 367 Gene3D Transferase(Phosphotransferase) domain 1 255 338 - -
Aed1g0700 367 SUPERFAMILY Protein kinase-like (PK-like) 90 309 IPR011009 -
Aed1g0700 367 ProSiteProfiles Protein kinase domain profile. 114 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g0700 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Aed1g0700 367 SMART serkin_6 114 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g0700 367 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 1 254 340 - -
Aed1g0700 367 PANTHER OS01G0253100 PROTEIN 5 255 IPR045271 GO:0004714|GO:0006468
Aed1g0700 367 PANTHER OS01G0253100 PROTEIN 254 340 IPR045271 GO:0004714|GO:0006468
Aed1g0700 367 Gene3D Phosphorylase Kinase; domain 1 85 189 - -
Aed1g0700 367 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 1 5 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0700 Aed-Chr1 8214581 8219939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0700 24 274 Glycoside Hydrolase AT3G07070 39.464 7.91e-49 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Aed1g0700 PK_Tyr_Ser-Thr 4.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0700 - - jre:109014317 513.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0700 1 8214581 8219939 Aed1g0700 1 8214581 8219939 ECH
Aed1g0700 1 8214581 8219939 Aed5g1036 5 8200018 8206046 PCT