Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0694 ATGCCCAACATTGGTTACGGTACCGACAAGAAAACCCGCCATTACCTACCAAATGGTTTCAAGAAATTTGTTGTGCACAATGTGAAAGACCTGGAACTCCTCATGATGCATAACATGACATACTGCGCTGAGATTGCTCACAATGTCTCCACAAGGAAGAGGAAGGACATAGTTGAGAGAGCTGCACAGCTTGATGTTGTCGTGATGAGTAGATTCCACTACAACGGTAGAATCATTTATGTTTTGTAG 249 0.4297 MPNIGYGTDKKTRHYLPNGFKKFVVHNVKDLELLMMHNMTYCAEIAHNVSTRKRKDIVERAAQLDVVVMSRFHYNGRIIYVL 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0694 82 PANTHER 60S RIBOSOMAL PROTEIN L32-1 1 72 - -
Aed1g0694 82 CDD Ribosomal_L32_L32e 1 68 IPR001515 GO:0003735|GO:0005840|GO:0006412
Aed1g0694 82 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 1 72 IPR001515 GO:0003735|GO:0005840|GO:0006412
Aed1g0694 82 SUPERFAMILY Ribosomal protein L32e 1 70 IPR036351 -
Aed1g0694 82 SMART Ribosomal_L32e_2 1 70 IPR001515 GO:0003735|GO:0005840|GO:0006412
Aed1g0694 82 Pfam Ribosomal protein L32 1 69 IPR001515 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0694 Aed-Chr1 8176413 8176661 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0694 1 72 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 83.333 6.40e-43 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0694 K02912 - gmx:100787561 139.428