Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0677 ATGGAAGGTTTTACCTTGCTTATGTTCAGCCTTGCCTTGCTAAATAATATAGCAGCTGCTACGGTGAGAGAAACTATTAGCACATTGCAATCCATCAATGATAGCCAGATCATAGTTTCACCTGGCAAAACCTATGCACTTGGATTCTTCAGTCCAGGAAGTTCCAAGAACCGTTATGTTGGAATTTGGTACTACAAAATCTCACCAAAGACTGTAGTATGGGTTGCCAACAGAGACAACCCTCTTAATGACTCATCAGGGGTTTTGAAGCTGAATGAGAGTGGAGTTCTAGTCCTTCTCAACCATAACAAGAGTGTCATCTGGTCTTCCAACTTGTCAAGGTCCGCGCGGTTTCCGGTTGCAAAGCTTTTGGATTCTGGAAATCTCATTGTGCAGGATGGAAACGATAACAATGAAGCAAAAGAAAAAGATTTAGTGTGGCAAAGTTTTGATTATCCGGGGAACACAATCTTGCCAGGACAGAAGTTTGGAAGAAATCTAGTTACGGGCCTAAACCGGTACATGTCATCATGGAACAGCTCTGATGATCCATCTCAAGGTGGATATAGTTATCAAATTGATACTAGTGGCTATCCACAGTTGGTTTTAAGAGATGGCACTTTCAAAAGATACCGTTTTGGATCATGGAATGGTATTCAGTTTAGTGGGGCACCTCAGTTGAAGCAAAATGCTTTTACTAGATTTAGTTTTGTTTCTGATGAGGAGGAGTTGTATTTTAGTTTTGAGCAAACCAACAAGTCAGTTTTTCACAGGATGGTGTTATCAGCAGATGGATATATCCTGGGAGATTTTTGGAATACTGAAGAAAAAGTTTGGAGCTTGCATGGAAAAATTCCTGTGGATGACTGTGATTACTATGACAAATGTGGAGCATATGCTACCTGTAATATAAACAATGTCCCTCCATGTAATTGCTTGGATGGATTTGTACCCAAAACGGGTGATATATATGGTGGTTGTGAGAGAAGAACTTCACTTAGTTGTCATGGAGACGGGTTTTCGAAGGTTTCAGGGTTGAAATTACCAGACACAGAGAAATCCTGGTTTAATAGAAGTATTAGCCTTGAGGATTGTAGGATATTGTGCATGAACAATTGCTCCTGTACTGCTTATGCAGCCTTGGATGTCAGTAAAGGGCCAAATGGGTGTTTACTATGGTTTGATGATCTGGTTGACATAAGAGACTTCACTGATGTTGATGAAGATATACACATAAGGTTGGCTGGGACAGAAAAAGCTATTGAAGGAAAGCAATTACATAAATCCAACATCCGGAAGCCAGAGACTGTTTTCATAAGTTGTGTGTTGTTTATTGCAATTTTAATCCTATGCTTAACCTTCATCATTTATAGACGGTGGAAGACACCGCCGAAAGGAGATGATCCATCTCAAGGTATATATAATGTTCAAGTTGATACTGCTGGATATCCGCAATTTGTTTTGAGAGAAGGCACTGTCAAAATATTTCGTTTTGGACCATGGAATGGTGTTCATACTAGCGGGTCACCGCAGGCGCAACAAAATAATCTGTTTTCAATTCATTATTTCTCTAATGAGGAAGAGCTGTATTTTAGTTTTGATCTTATCAACAAGTCATCTCCCTTTAGGTTGGTGTTAGAACTAGATGGAATTCTCAGGGCGAAGTATTGGAGTGATGAAGGAAATAGTTGGAGAGAGTTTACAAGATCTCCAGTGGATGACTGTGATAATTATGAAAAATGTGGAGCATATGCTAGATGTAAAGCAATTGAAAGAAAGCAATCACATAAATCAAGCAAACAGAAGCAAGAGATTGTTATCATAAGCTGTGTGCTTTCTGTATCAATTTTAATGCTATGCTTAACCTTCATCATGTATTATCGACGGTGGAAGACAAGACAGAAAGGCAGTTATGTAGTTCTTAACTTTGATGGATATATGCCACCAGAGTATATAATTGATGGAGCTTATTCAACAAAGTCAGATGTTTTCAGCTTTGGTGTGTTGATATTGGAGATAGTGAGTGGAAAGAGAAATAGAGGGTTCTGTCATGAAGACAATCTTCTGGGGCATGCATGGAGACTATTTAATGAAGGCAAATGCTATGAAATAGTTGATGCAACAATGAGAGACTCAGTCAATTTATCTGCAGTACTAAGATCAATTCATGTGGGCTTACTTTGTGTGCAACTAAGTCCATACGATAGGCCGAACATGTCATCAGTGGTTCTGATGCTGAGCAGTGAATCTGAACTGCCTCAGCCAAAATTACCTGGATTTGTAACTAGTAGAAATCGGGTTGAGGACAGTTCTTCATCAAGAAGTTATAAAGAATACTCAAATAATGAAATGACAATTAGCATATTTTCTGCTAGATAG 2379 0.3897 MEGFTLLMFSLALLNNIAAATVRETISTLQSINDSQIIVSPGKTYALGFFSPGSSKNRYVGIWYYKISPKTVVWVANRDNPLNDSSGVLKLNESGVLVLLNHNKSVIWSSNLSRSARFPVAKLLDSGNLIVQDGNDNNEAKEKDLVWQSFDYPGNTILPGQKFGRNLVTGLNRYMSSWNSSDDPSQGGYSYQIDTSGYPQLVLRDGTFKRYRFGSWNGIQFSGAPQLKQNAFTRFSFVSDEEELYFSFEQTNKSVFHRMVLSADGYILGDFWNTEEKVWSLHGKIPVDDCDYYDKCGAYATCNINNVPPCNCLDGFVPKTGDIYGGCERRTSLSCHGDGFSKVSGLKLPDTEKSWFNRSISLEDCRILCMNNCSCTAYAALDVSKGPNGCLLWFDDLVDIRDFTDVDEDIHIRLAGTEKAIEGKQLHKSNIRKPETVFISCVLFIAILILCLTFIIYRRWKTPPKGDDPSQGIYNVQVDTAGYPQFVLREGTVKIFRFGPWNGVHTSGSPQAQQNNLFSIHYFSNEEELYFSFDLINKSSPFRLVLELDGILRAKYWSDEGNSWREFTRSPVDDCDNYEKCGAYARCKAIERKQSHKSSKQKQEIVIISCVLSVSILMLCLTFIMYYRRWKTRQKGSYVVLNFDGYMPPEYIIDGAYSTKSDVFSFGVLILEIVSGKRNRGFCHEDNLLGHAWRLFNEGKCYEIVDATMRDSVNLSAVLRSIHVGLLCVQLSPYDRPNMSSVVLMLSSESELPQPKLPGFVTSRNRVEDSSSSRSYKEYSNNEMTISIFSAR 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0677 792 Gene3D Hepatocyte Growth Factor 333 413 - -
Aed1g0677 792 CDD PAN_AP_plant 331 415 - -
Aed1g0677 792 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 11 425 - -
Aed1g0677 792 Gene3D Transferase(Phosphotransferase) domain 1 614 756 - -
Aed1g0677 792 CDD B_lectin 30 153 IPR001480 -
Aed1g0677 792 Pfam D-mannose binding lectin 71 178 IPR001480 -
Aed1g0677 792 ProSiteProfiles PAN/Apple domain profile. 335 415 IPR003609 -
Aed1g0677 792 SMART ntp_6 335 414 IPR003609 -
Aed1g0677 792 PIRSF SRK 639 792 IPR024171 GO:0004674
Aed1g0677 792 PIRSF SRK 458 597 IPR024171 GO:0004674
Aed1g0677 792 PIRSF SRK 2 467 IPR024171 GO:0004674
Aed1g0677 792 PIRSF SRK 588 642 IPR024171 GO:0004674
Aed1g0677 792 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Aed1g0677 792 Gene3D - 18 150 IPR036426 -
Aed1g0677 792 Pfam Protein tyrosine and serine/threonine kinase 646 744 IPR001245 GO:0004672|GO:0006468
Aed1g0677 792 Pfam S-locus glycoprotein domain 211 319 IPR000858 GO:0048544
Aed1g0677 792 Pfam S-locus glycoprotein domain 496 592 IPR000858 GO:0048544
Aed1g0677 792 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 184 IPR036426 -
Aed1g0677 792 PANTHER - 466 588 - -
Aed1g0677 792 PANTHER - 639 788 - -
Aed1g0677 792 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 466 588 - -
Aed1g0677 792 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 639 788 - -
Aed1g0677 792 PANTHER - 11 425 - -
Aed1g0677 792 Pfam Domain of unknown function (DUF3403) 747 792 IPR021820 GO:0004674
Aed1g0677 792 SUPERFAMILY Protein kinase-like (PK-like) 645 769 IPR011009 -
Aed1g0677 792 SMART blect_4 29 153 IPR001480 -
Aed1g0677 792 Pfam PAN-like domain 335 400 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0677 Aed-Chr1 8044240 8053662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0677 632 789 Receptor kinase-like Gene Family AT4G23140 41.071 7.37e-33 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed1g0677 PK_Tyr_Ser-Thr 4.5e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0677 - - gmx:100795006 860.522