Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0661 ATGTTATTTGTGGTAAGGGGCCACCTTCAAAGTAGCCAAGTCCTACGAGACGGGGTGAAGAGCTTCTGCATGTTAGGGCCGGGGAACTTCAGCGGCGACGAGCTTCTCTCATGGTGTCTCAGAAGGCCATTCATAGAGCGTCTTCCACCGTCCTCGTGCACTCTGGTGACACTCGAAACCATAGAGGCATTCGGACTCGAGGCACAGGACGTGAAGTACGTGACGCAGCATTTCAGGTACACATTTGTGAACGAAAAGGTTAAGAGAAGTGCAAGGTATTACTCGCCAGGGTGGAGGACATGGGCTTCGGTGGCAATTCAGTTGGCTTGGAGGAGGTATAGACATCGCTTGACTTTGACTTCTTTGTCCTTTATAAGGCCTCGCAGGCCTGTCTCAAGGTGTGCCTCCTTGGAAGAGGATAGGCTTCGTCTCTATACTGCTATGTTAACCTCACCAAAACCTAATCAGGATGATTTTGACTTCTGA 486 0.5021 MLFVVRGHLQSSQVLRDGVKSFCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTLETIEAFGLEAQDVKYVTQHFRYTFVNEKVKRSARYYSPGWRTWASVAIQLAWRRYRHRLTLTSLSFIRPRRPVSRCASLEEDRLRLYTAMLTSPKPNQDDFDF 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0661 161 SUPERFAMILY cAMP-binding domain-like 1 78 IPR018490 -
Aed1g0661 161 Gene3D Jelly Rolls 1 80 IPR014710 -
Aed1g0661 161 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 1 158 - -
Aed1g0661 161 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0661 Aed-Chr1 7913889 7914374 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0661 1 160 Ion Channels AT5G54250 90.000 3.79e-102 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0661 K05391 - gmx:100800795 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0661 1 7913889 7914374 Aed1g0661 1 7913889 7914374 ECH