Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0659 ATGGATGAGGCGGACACGGTTCGCATTCTGGTGGCGACGGACTGCCACCTCGGGTACATGGAGAAGGACGAGGTTCGCCGCCATGACTCATTCCACGCCTTCGAGGAGATTTGTGCCATCGCCGAGCGCCACCGCGTCGACTTCGTGCTCCTCGGAGGCGACCTCTTCCACGAGAACAAGCCCTCCCGGTTTGGTCACGTGAACTATGAGGATCCTCACTTCAATGTTGGTTTGCCGGTGTTTACTATTCACGGAAATCATGACGATCCTGCTGGTGTGGATAACCTCTCTGTAGTTGATATTCTCTCAGCATGTAATCTAGTCAACTACTTTGGGAAAACAGTTCTTGGGGGTTCTGGTGTTGGTCAGATCACTATCCACCCTATTCTTATCAAGAAGGGTTCAACATCTGTAGCTCTGTATGGTCTGGGAAACATTAGAGATGAAAGGCTTAATAGGATGTTTCAAACACCACATGCTGTGCAATGGATGCGGCCTGAATCTCAGGAAGGGTGTCAAGTGTCTGATTGGTTCAACATTCTTGTACTTCATCAGAACAGGTTATGTCTGGTTAAAACAAATCCAAAAAATGCAATAAATGAGCACTTCTTGCCACGCTTCCTAGACTTCATTGTGTGGGGCCATGAGCATGAATGTTTGGTTGATCCACAGGAAGTTCCAGGGATGGGATTTCACATTTCGCAACCAGGGTCATCAGTAGCTACATCACTTATTGACGGAGAATCAAAGCCAAAGCATGTACTTCTTCTAGAAATTAAGGGAAATCAATATCGCCCAACTAAGATACCTTTGATGTCTGTGCGGCCTTTTGAGTATACTGAGGTTATACTAAAAGATGAGTCGGATATTGATCCTAATGATCAAAGTTCTATTCTTGAACACCTCCACAAAGTGAAGATGATTCAGGTTGGGAAACTGATAGAAAAGTCTAGTAAGCAGGTCGTTAATAGAAAAGAACTCAAGCTTCCACTAATACGTATCAAGGTAGATTACTCTGGATTTATGACTATAAATCCTCAAAGATTTGGGCAGAAATATGTTGGGAAGGTTGCAAACCCCCAAGACATTCTCATTTTCTCAAAGGCTACAAAAAGGGCCAAGGTTGAAGGAATAATTGATGATTCAGAACGACTTCGTCCAGAAGAATTAAACCAACAGAACATAGAGGCTTTGGTTGCTGAAAGCAATCTGAAAATGGAGATTCTGCCAGTCAATGATTTGGATATTGCATTGCAAAATTTTGTGAACAAAGATGATAAAATGGCATTTTACTCTTGTGTAAAATACAATATCGAGGAAACACGAAATAAAATTTCTAAGGATTCAGATAGCACGAAGTTTGAAGAGGACGATTTAATTGTTAAAGTTGGAGAGTCCTTGGAGGAACGCATCAAGGAACGATCTGTACACTCCAAGGAACCCACACAGCTCACTGCTGATGCTCAACCATGGAAGGATTTCCAAGGCAAAAGTGCTGCTGGAACTGGAAGTGCAGTTTCCTTTAGTGATGATGAAGATGCGATGCCAGTATCTAGCTCAAGGCCAAGTACTAGAGGTCGGAAAGGGTCATCTAGTGCATCTCAAACTACAACCAGAGGAAGGGGCAGGGGCAGGGGAAGAGGTAGAGGTTCCAGCACCATGAAGCAGACAACTCTTGATGGAGCTTTAGGGTTTCGTGTTTCTCAGAGGTCTGCCTCAGTTGCTGCAGCAACTGCCATCCGAAGTGGTGCTGATGAGGATAAATTGGCTTCTGCTTCAAGTGATGATGCCAATAAAAATGATGTTGAAGAGATTGATGATAGTTCGGAAAATGAATCCAATCTACCAGGACAGAAGAGGGCTGCTTCAAAGGGAAGAGCAACAACAGCAACCTCTGCTGGCACTGTTCTTAAACAAACACCTTTCCTTGGCCAAGGAAAGGGTGCCAATGCTCTGAGGGATGCTGTCTCCATGGGAACTGGGAAGTACACCATGGGTAATGAATTGTGGTATGGACCAGACAGAGTGAAATACTTGGGACCCTTTTCAGCCCAGACCCCTTCATACTTGAAAGGAGAATTCCCAGGGGATTATGGCTGGGACACTGCTGGCTTATCTGCTGACCCTGAAGCATTTGCCAAGAACAGGGCTCTTGAGGTGCTAGAGAAGTGGTTGAGAGTGGACTTCAAGGAGCCAGTGTGGTTCAAAGCTGGATCCCAAATATTCTCAGAAGGTGGGCTTGACTATTTGGGTAACCCAAACCTTGTTCATGCACAAAGCATCCTTGCAGTATTGGGCTTCCAAGTTATCTTAATGGGCCTTGTTGAAGGGTACCGCATCAATGGGCTTGATGGGGTTGGAGAGGGCAATGACCTCTACCCAGGGGGCCAATACTTTGACCCATTGGGCCTTGCTGATGACCCAGTCACTTTTGCTGAGCTCAAAGTGAAGGAGATCAAGAATGGAAGGTTGGCCATGTTCTCTATGTTTGGGTTCTTTGTTCAAGCCATTGTCACTGGTAAAGGCCCATTGGAGAACCTTTTGGACCACCTTGACAACCCTGTTGCTAACAATGCTTGGGTCTATGCCACTAAGTTTGCCCCTGGATCTTAA 2613 0.4535 MDEADTVRILVATDCHLGYMEKDEVRRHDSFHAFEEICAIAERHRVDFVLLGGDLFHENKPSRFGHVNYEDPHFNVGLPVFTIHGNHDDPAGVDNLSVVDILSACNLVNYFGKTVLGGSGVGQITIHPILIKKGSTSVALYGLGNIRDERLNRMFQTPHAVQWMRPESQEGCQVSDWFNILVLHQNRLCLVKTNPKNAINEHFLPRFLDFIVWGHEHECLVDPQEVPGMGFHISQPGSSVATSLIDGESKPKHVLLLEIKGNQYRPTKIPLMSVRPFEYTEVILKDESDIDPNDQSSILEHLHKVKMIQVGKLIEKSSKQVVNRKELKLPLIRIKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKATKRAKVEGIIDDSERLRPEELNQQNIEALVAESNLKMEILPVNDLDIALQNFVNKDDKMAFYSCVKYNIEETRNKISKDSDSTKFEEDDLIVKVGESLEERIKERSVHSKEPTQLTADAQPWKDFQGKSAAGTGSAVSFSDDEDAMPVSSSRPSTRGRKGSSSASQTTTRGRGRGRGRGRGSSTMKQTTLDGALGFRVSQRSASVAAATAIRSGADEDKLASASSDDANKNDVEEIDDSSENESNLPGQKRAASKGRATTATSAGTVLKQTPFLGQGKGANALRDAVSMGTGKYTMGNELWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVLEKWLRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGYRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0659 870 MobiDBLite consensus disorder prediction 611 632 - -
Aed1g0659 870 CDD MPP_Mre11_N 8 244 IPR041796 -
Aed1g0659 870 Pfam Mre11 DNA-binding presumed domain 265 421 IPR007281 GO:0004519|GO:0005634|GO:0006302|GO:0030145
Aed1g0659 870 PANTHER DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11 62 629 - -
Aed1g0659 870 PANTHER DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11 1 63 - -
Aed1g0659 870 MobiDBLite consensus disorder prediction 513 541 - -
Aed1g0659 870 Gene3D Chlorophyll a/b binding protein domain 677 863 - -
Aed1g0659 870 SUPERFAMILY Metallo-dependent phosphatases 8 300 IPR029052 -
Aed1g0659 870 Pfam Chlorophyll A-B binding protein 687 720 IPR022796 -
Aed1g0659 870 Pfam Chlorophyll A-B binding protein 731 836 IPR022796 -
Aed1g0659 870 Gene3D - 2 275 IPR029052 -
Aed1g0659 870 SUPERFAMILY Chlorophyll a-b binding protein 669 867 - -
Aed1g0659 870 MobiDBLite consensus disorder prediction 472 562 - -
Aed1g0659 870 Gene3D Mre11, capping domain 276 377 IPR038487 -
Aed1g0659 870 SMART Mre11_DNA_bind_2 264 421 IPR007281 GO:0004519|GO:0005634|GO:0006302|GO:0030145
Aed1g0659 870 MobiDBLite consensus disorder prediction 580 632 - -
Aed1g0659 870 Pfam Calcineurin-like phosphoesterase 8 219 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0659 Aed-Chr1 7888884 7900449 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0659 630 869 Chloroplast and Mitochondria Gene Families AT2G05070 62.687 2.79e-101 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0659 K10865 - gmx:100801335 1139.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0659 1 7888884 7900449 Aed1g0659 1 7888884 7900449 ECH