Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed1g0659 | ATGGATGAGGCGGACACGGTTCGCATTCTGGTGGCGACGGACTGCCACCTCGGGTACATGGAGAAGGACGAGGTTCGCCGCCATGACTCATTCCACGCCTTCGAGGAGATTTGTGCCATCGCCGAGCGCCACCGCGTCGACTTCGTGCTCCTCGGAGGCGACCTCTTCCACGAGAACAAGCCCTCCCGGTTTGGTCACGTGAACTATGAGGATCCTCACTTCAATGTTGGTTTGCCGGTGTTTACTATTCACGGAAATCATGACGATCCTGCTGGTGTGGATAACCTCTCTGTAGTTGATATTCTCTCAGCATGTAATCTAGTCAACTACTTTGGGAAAACAGTTCTTGGGGGTTCTGGTGTTGGTCAGATCACTATCCACCCTATTCTTATCAAGAAGGGTTCAACATCTGTAGCTCTGTATGGTCTGGGAAACATTAGAGATGAAAGGCTTAATAGGATGTTTCAAACACCACATGCTGTGCAATGGATGCGGCCTGAATCTCAGGAAGGGTGTCAAGTGTCTGATTGGTTCAACATTCTTGTACTTCATCAGAACAGGTTATGTCTGGTTAAAACAAATCCAAAAAATGCAATAAATGAGCACTTCTTGCCACGCTTCCTAGACTTCATTGTGTGGGGCCATGAGCATGAATGTTTGGTTGATCCACAGGAAGTTCCAGGGATGGGATTTCACATTTCGCAACCAGGGTCATCAGTAGCTACATCACTTATTGACGGAGAATCAAAGCCAAAGCATGTACTTCTTCTAGAAATTAAGGGAAATCAATATCGCCCAACTAAGATACCTTTGATGTCTGTGCGGCCTTTTGAGTATACTGAGGTTATACTAAAAGATGAGTCGGATATTGATCCTAATGATCAAAGTTCTATTCTTGAACACCTCCACAAAGTGAAGATGATTCAGGTTGGGAAACTGATAGAAAAGTCTAGTAAGCAGGTCGTTAATAGAAAAGAACTCAAGCTTCCACTAATACGTATCAAGGTAGATTACTCTGGATTTATGACTATAAATCCTCAAAGATTTGGGCAGAAATATGTTGGGAAGGTTGCAAACCCCCAAGACATTCTCATTTTCTCAAAGGCTACAAAAAGGGCCAAGGTTGAAGGAATAATTGATGATTCAGAACGACTTCGTCCAGAAGAATTAAACCAACAGAACATAGAGGCTTTGGTTGCTGAAAGCAATCTGAAAATGGAGATTCTGCCAGTCAATGATTTGGATATTGCATTGCAAAATTTTGTGAACAAAGATGATAAAATGGCATTTTACTCTTGTGTAAAATACAATATCGAGGAAACACGAAATAAAATTTCTAAGGATTCAGATAGCACGAAGTTTGAAGAGGACGATTTAATTGTTAAAGTTGGAGAGTCCTTGGAGGAACGCATCAAGGAACGATCTGTACACTCCAAGGAACCCACACAGCTCACTGCTGATGCTCAACCATGGAAGGATTTCCAAGGCAAAAGTGCTGCTGGAACTGGAAGTGCAGTTTCCTTTAGTGATGATGAAGATGCGATGCCAGTATCTAGCTCAAGGCCAAGTACTAGAGGTCGGAAAGGGTCATCTAGTGCATCTCAAACTACAACCAGAGGAAGGGGCAGGGGCAGGGGAAGAGGTAGAGGTTCCAGCACCATGAAGCAGACAACTCTTGATGGAGCTTTAGGGTTTCGTGTTTCTCAGAGGTCTGCCTCAGTTGCTGCAGCAACTGCCATCCGAAGTGGTGCTGATGAGGATAAATTGGCTTCTGCTTCAAGTGATGATGCCAATAAAAATGATGTTGAAGAGATTGATGATAGTTCGGAAAATGAATCCAATCTACCAGGACAGAAGAGGGCTGCTTCAAAGGGAAGAGCAACAACAGCAACCTCTGCTGGCACTGTTCTTAAACAAACACCTTTCCTTGGCCAAGGAAAGGGTGCCAATGCTCTGAGGGATGCTGTCTCCATGGGAACTGGGAAGTACACCATGGGTAATGAATTGTGGTATGGACCAGACAGAGTGAAATACTTGGGACCCTTTTCAGCCCAGACCCCTTCATACTTGAAAGGAGAATTCCCAGGGGATTATGGCTGGGACACTGCTGGCTTATCTGCTGACCCTGAAGCATTTGCCAAGAACAGGGCTCTTGAGGTGCTAGAGAAGTGGTTGAGAGTGGACTTCAAGGAGCCAGTGTGGTTCAAAGCTGGATCCCAAATATTCTCAGAAGGTGGGCTTGACTATTTGGGTAACCCAAACCTTGTTCATGCACAAAGCATCCTTGCAGTATTGGGCTTCCAAGTTATCTTAATGGGCCTTGTTGAAGGGTACCGCATCAATGGGCTTGATGGGGTTGGAGAGGGCAATGACCTCTACCCAGGGGGCCAATACTTTGACCCATTGGGCCTTGCTGATGACCCAGTCACTTTTGCTGAGCTCAAAGTGAAGGAGATCAAGAATGGAAGGTTGGCCATGTTCTCTATGTTTGGGTTCTTTGTTCAAGCCATTGTCACTGGTAAAGGCCCATTGGAGAACCTTTTGGACCACCTTGACAACCCTGTTGCTAACAATGCTTGGGTCTATGCCACTAAGTTTGCCCCTGGATCTTAA | 2613 | 0.4535 | MDEADTVRILVATDCHLGYMEKDEVRRHDSFHAFEEICAIAERHRVDFVLLGGDLFHENKPSRFGHVNYEDPHFNVGLPVFTIHGNHDDPAGVDNLSVVDILSACNLVNYFGKTVLGGSGVGQITIHPILIKKGSTSVALYGLGNIRDERLNRMFQTPHAVQWMRPESQEGCQVSDWFNILVLHQNRLCLVKTNPKNAINEHFLPRFLDFIVWGHEHECLVDPQEVPGMGFHISQPGSSVATSLIDGESKPKHVLLLEIKGNQYRPTKIPLMSVRPFEYTEVILKDESDIDPNDQSSILEHLHKVKMIQVGKLIEKSSKQVVNRKELKLPLIRIKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKATKRAKVEGIIDDSERLRPEELNQQNIEALVAESNLKMEILPVNDLDIALQNFVNKDDKMAFYSCVKYNIEETRNKISKDSDSTKFEEDDLIVKVGESLEERIKERSVHSKEPTQLTADAQPWKDFQGKSAAGTGSAVSFSDDEDAMPVSSSRPSTRGRKGSSSASQTTTRGRGRGRGRGRGSSTMKQTTLDGALGFRVSQRSASVAAATAIRSGADEDKLASASSDDANKNDVEEIDDSSENESNLPGQKRAASKGRATTATSAGTVLKQTPFLGQGKGANALRDAVSMGTGKYTMGNELWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVLEKWLRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGYRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS | 870 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed1g0659 | 870 | MobiDBLite | consensus disorder prediction | 611 | 632 | - | - | |
Aed1g0659 | 870 | CDD | MPP_Mre11_N | 8 | 244 | IPR041796 | - | |
Aed1g0659 | 870 | Pfam | Mre11 DNA-binding presumed domain | 265 | 421 | IPR007281 | GO:0004519|GO:0005634|GO:0006302|GO:0030145 | |
Aed1g0659 | 870 | PANTHER | DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11 | 62 | 629 | - | - | |
Aed1g0659 | 870 | PANTHER | DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11 | 1 | 63 | - | - | |
Aed1g0659 | 870 | MobiDBLite | consensus disorder prediction | 513 | 541 | - | - | |
Aed1g0659 | 870 | Gene3D | Chlorophyll a/b binding protein domain | 677 | 863 | - | - | |
Aed1g0659 | 870 | SUPERFAMILY | Metallo-dependent phosphatases | 8 | 300 | IPR029052 | - | |
Aed1g0659 | 870 | Pfam | Chlorophyll A-B binding protein | 687 | 720 | IPR022796 | - | |
Aed1g0659 | 870 | Pfam | Chlorophyll A-B binding protein | 731 | 836 | IPR022796 | - | |
Aed1g0659 | 870 | Gene3D | - | 2 | 275 | IPR029052 | - | |
Aed1g0659 | 870 | SUPERFAMILY | Chlorophyll a-b binding protein | 669 | 867 | - | - | |
Aed1g0659 | 870 | MobiDBLite | consensus disorder prediction | 472 | 562 | - | - | |
Aed1g0659 | 870 | Gene3D | Mre11, capping domain | 276 | 377 | IPR038487 | - | |
Aed1g0659 | 870 | SMART | Mre11_DNA_bind_2 | 264 | 421 | IPR007281 | GO:0004519|GO:0005634|GO:0006302|GO:0030145 | |
Aed1g0659 | 870 | MobiDBLite | consensus disorder prediction | 580 | 632 | - | - | |
Aed1g0659 | 870 | Pfam | Calcineurin-like phosphoesterase | 8 | 219 | IPR004843 | GO:0016787 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed1g0659 | Aed-Chr1 | 7888884 | 7900449 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed1g0659 | 630 | 869 | Chloroplast and Mitochondria Gene Families | AT2G05070 | 62.687 | 2.79e-101 | 313 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed1g0659 | K10865 | - | gmx:100801335 | 1139.41 |