Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0658 ATGATGATATCAGCTTCTATGTCTTCTCTAACGAGGAGTTCACTGGAGGAGATGCTTGAATCGCTTCGCCGGAGAGAGGAGGAGGAGAGGCCGAAGGACTTGCCGCCGGCATTGCCGTCGCGGCCTCCGTCGAGGGCGCGGTTGCCACCGGGGAGGAGGTCCTTGCCTAGCAACTTCAAGGTTGATGATGAGATGGGGCACAGAAGGAAGGGTAGTTTTGGGCTCAAGAAAGTGAAGTTGAATGTGGACTCACCTTATGAAGTCCAATCACAATCAGAAGAGATAGTGAGTGAACAACCATCACCCACTACGGTTTCTACAGCCAATGATTATACTGCTGATTGTGAAGCTCCTCCTACGTCTGGAGAGTTGGAGGATGATAATGTTGCTTATTTCATCAAAAAGAAACTTCATGTTTGGTGTAGGCAACCAAGAGGAAAGTGGGAGCTAGGAACGATACAGTCAACTTCAGGAGAGGAAGCATCTGTTTCACTCTCAAATGGAAATGTTATGATAGTAGCCAGATCAGAGCTCCTACCAGCTAATCCTGATATTTTAGAGGGTGTTGAAGATCTTATACAGCTCAGTTATTTAAATGATCCCTCAGTTCTTCACAATCTTCAGTTTAGATATTCTCAGGATATGATTTATAGTAAAGCAGGGCCAATTTTAATTGCACTCAATCCTTTCAAAGATGTCCCGATTTATGGAAACAATTATATCTCAGATTATAGGGAGAAACTTATGGATAAGCCTCATGTTTATGCTATGGCAGATGCAGCTTATAATGAGATGATGAGAGATGAAACAAATCAGTCCATTATCATAAGTGGAGAGAGTGGATCTGGGAAAACAGAGACAGCAAAATTTGCTATGCAATACTTAGGTGCTCTTGGTGGTGGCTGTTCTGGAATAGAAAATGAAATTCTTCAGACAAATTTTATACTAGAAGCTTTTGGGAATGCAAAAACAGCTAGAAATGACAACTCTAGCCGATTTGGGAAATTGACTGAAATCCATTTTAGCATACTGGGGAAAATTTGTGGGGCAAAAATTCAAACTTTTCTGTTAGAAAAGTCAAGAGTTGTTCAACTTGCCTGTGGCGAAAGGTCATATCACATATTTTATCAACTTTGTGCCGGATCTTCATCTGATCTTAAAGAAAAACTGAATCTTAGGGTGGCTAGCGAATATAAATATCTTAACCAGAGTGACTGCATGACAATTGATGGTGTTGATGATGCTAAAAGGTTTCATAAGCTGATGGAAGCATTGGATGTTATTCGAATGTGCAAAGAGGATCAAGAGCTTGTTTTTAAGATGCTGTCTGCAATATTATGGTTGGGAAATATATCATTCCAAGATACTGACAGTGAAAATCACATTGTGGTGGTGAATGATGAAGCTGTAACCAATGCTGCTTTGCTAATGGGTTGCAGTTCCCATGAGCTAATGGAAGCATTATCTACCCATAAAATCCAAGCTGGCAAGGATACTATTACTAAGACATTGACCTTGCGGCAGGCAATCGATGCAAGAGATGCATTAGCAAAATTTATCTATGCAAATTTGTTTGATTGGCTTGTAGAACAAGTTAATAAGTCACTTGAAGTGGGTAAACGACGTACTGGCAGATCCATAAGTATCCTTGATATTTATGGGTTTGAGTCATTCCAGAATAACAGCTTTGAACAATTTTGTATAAACTATGCCAATGAGAGGCTTCAACAACATTTCAATCGGCATCTGTTTAAACTTGAGCAGGAGGACTATGAGTTAGATGGCATTGATTGGACCAAAGTAGATTTTGAGGACAATCAAGTGTGTTTGGATCTCTTTGAGAAGAAGCCTCTGGGGCTATTCTCTTTGTTGGATGAGGAATCGAATTTTCCCAGGGCCACTGATCTAACACTTGCCAACAAGCTTAAGCAGCACCTGCACGCTAATTCTTGCTTTAAAGGGGAAAGAGGCAGGGCTTTTGGTGTCTGTCATTATGCAGGGGAGGTTTTGTATGATACAAGTGGTTTCCTAGAAAAGAACAGAGATCCATTACCGTCTGATTCCATTCAACTACTGGCATCATGTAGTTGTGAACTGCTACAGTTGTTCTCCAAGATGCTTGATGGAGGTGCTTTGGATTCACAAAAGCAGAGTGTTGGCACAAAGTTCAAGGGTCAATTGTTCAAGTTGATGCATCAGATGGAGAGCACCACACCTCACTTTATTCGCTGTATAAAGCCAAACCCTAAGCAGCATCCTGGAATATATGATCAAGATCTCGTGCTACAACAGCTTAAGTGTTGTGGAGTTTTGGAGGTTGTTAGGATTTCAAGGGCTGGATATCCTACTCGAATGACACATCAAGAATTTTCCAGAAGGTATGGCTTTCTGCTTTCTGAGGCAAACACGTCTCAGGATCCATTGAGCATTTCAGTTGCTGTTTTGCAACAGTTTAATATCCCTCCTGAAATGTACCAAGTTGGCTTCACCAAACTGTATCTTCGAACAGGGCAGATTGGGGCTCTGGAGGACAGGAGAAAACATATTTTGCAGGGAATACTTGGGATTCAAAAAAGCTTTCGTGGTTATCAAGCTCGTTGTCATTACAATGAACTTAAGAATGGAGTGACTATTTTACAATCATTTGTTCGTGGAGAAATTGCAAGAAGGGAATATGGTGTTATGGTGAAGTCTTCTATGACTATTTTTTCTGAAAATATTGAGGAGATACACGCAGCCACATTACTACAATCTGTAATTCGTGGGTGGCTGGTTCGGAGGCATGCTAGTGGCAAGAATAAGTTAAAGAAATCTCATGAAAATGCAAGATCTAGGCGAAGGTCACATGTGAAGACTCCTGATGTAAAGGATGTATCTGGTGAGCGGGGTCAGAATCTGCCTTCAGCTTTAGCAGAACTCCAAAAGCGGGTTATCAAGGCTGAAGCTACCATAGAGCAAAAGGAAGAGGAAAATGCCGAATTGAAGGAGCAGCTAAAACAATTTGAGAGAAGGTGGATTGAATATGAGAAAAGGATGAAATCAATGGAGGAGATGTGGCAAAAACAGATGGTATCTTTGCAAATGAGCCTTGCTGCTGCTAGAAAGAGCCTTGCTTCTGAGAATACCAGCGGTCAAATTTCAAGACGTGATGTTGTGTCACCTTTAGGCTATGATTCAGATGCTACTTCTGTGGGGTCTCGAACGCCCCGTGCAAGAACACCTTTGAAGTATTCTAGTAGTCTTACTGAATGTACCAGAGCAGGGAGAGATGCTAACGGTTCTTTGGCTTCAGTCAGCAACCTGATGAAGGAATTTGAGCAACGCAGACATACCTTTGATGATGAGGCCAGAGATATGGTCGAGTTTAAAACGGGTCAATCGGCTAGCATGAATACTGTTGAAGACCTTCGGAAACTCAAACACAGTTTCGAGGGGTGGAAGAAAGAATACAAGGCTAGACTAAAAGAGACAAAAGCAAGACTTCAAAAATCAGAAATGGATAAAAATCGGCGGAGATGGTGGGGGAAATTGAGTTCTAAAGCACTATAG 3549 0.4156 MMISASMSSLTRSSLEEMLESLRRREEEERPKDLPPALPSRPPSRARLPPGRRSLPSNFKVDDEMGHRRKGSFGLKKVKLNVDSPYEVQSQSEEIVSEQPSPTTVSTANDYTADCEAPPTSGELEDDNVAYFIKKKLHVWCRQPRGKWELGTIQSTSGEEASVSLSNGNVMIVARSELLPANPDILEGVEDLIQLSYLNDPSVLHNLQFRYSQDMIYSKAGPILIALNPFKDVPIYGNNYISDYREKLMDKPHVYAMADAAYNEMMRDETNQSIIISGESGSGKTETAKFAMQYLGALGGGCSGIENEILQTNFILEAFGNAKTARNDNSSRFGKLTEIHFSILGKICGAKIQTFLLEKSRVVQLACGERSYHIFYQLCAGSSSDLKEKLNLRVASEYKYLNQSDCMTIDGVDDAKRFHKLMEALDVIRMCKEDQELVFKMLSAILWLGNISFQDTDSENHIVVVNDEAVTNAALLMGCSSHELMEALSTHKIQAGKDTITKTLTLRQAIDARDALAKFIYANLFDWLVEQVNKSLEVGKRRTGRSISILDIYGFESFQNNSFEQFCINYANERLQQHFNRHLFKLEQEDYELDGIDWTKVDFEDNQVCLDLFEKKPLGLFSLLDEESNFPRATDLTLANKLKQHLHANSCFKGERGRAFGVCHYAGEVLYDTSGFLEKNRDPLPSDSIQLLASCSCELLQLFSKMLDGGALDSQKQSVGTKFKGQLFKLMHQMESTTPHFIRCIKPNPKQHPGIYDQDLVLQQLKCCGVLEVVRISRAGYPTRMTHQEFSRRYGFLLSEANTSQDPLSISVAVLQQFNIPPEMYQVGFTKLYLRTGQIGALEDRRKHILQGILGIQKSFRGYQARCHYNELKNGVTILQSFVRGEIARREYGVMVKSSMTIFSENIEEIHAATLLQSVIRGWLVRRHASGKNKLKKSHENARSRRRSHVKTPDVKDVSGERGQNLPSALAELQKRVIKAEATIEQKEEENAELKEQLKQFERRWIEYEKRMKSMEEMWQKQMVSLQMSLAAARKSLASENTSGQISRRDVVSPLGYDSDATSVGSRTPRARTPLKYSSSLTECTRAGRDANGSLASVSNLMKEFEQRRHTFDDEARDMVEFKTGQSASMNTVEDLRKLKHSFEGWKKEYKARLKETKARLQKSEMDKNRRRWWGKLSSKAL 1182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0658 1182 MobiDBLite consensus disorder prediction 931 946 - -
Aed1g0658 1182 Coils Coil 1147 1167 - -
Aed1g0658 1182 Gene3D - 558 737 - -
Aed1g0658 1182 ProSiteProfiles Myosin motor domain profile. 187 847 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed1g0658 1182 CDD MYSc_Myo8 201 835 IPR036022 -
Aed1g0658 1182 MobiDBLite consensus disorder prediction 1058 1079 - -
Aed1g0658 1182 Gene3D Myosin VI head, motor domain, U50 subdomain 427 535 - -
Aed1g0658 1182 SMART iq_5 871 893 IPR000048 GO:0005515
Aed1g0658 1182 SMART iq_5 908 930 IPR000048 GO:0005515
Aed1g0658 1182 SMART iq_5 848 870 IPR000048 GO:0005515
Aed1g0658 1182 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 897 IPR027417 -
Aed1g0658 1182 MobiDBLite consensus disorder prediction 1059 1079 - -
Aed1g0658 1182 PRINTS Myosin heavy chain signature 599 627 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed1g0658 1182 PRINTS Myosin heavy chain signature 314 341 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed1g0658 1182 PRINTS Myosin heavy chain signature 546 574 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed1g0658 1182 PRINTS Myosin heavy chain signature 271 296 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed1g0658 1182 PRINTS Myosin heavy chain signature 217 236 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed1g0658 1182 PANTHER MYOSIN 120 1180 - -
Aed1g0658 1182 ProSiteProfiles IQ motif profile. 909 938 IPR000048 GO:0005515
Aed1g0658 1182 SMART MYSc_2a 181 848 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed1g0658 1182 ProSiteProfiles IQ motif profile. 851 877 IPR000048 GO:0005515
Aed1g0658 1182 ProSiteProfiles IQ motif profile. 872 901 IPR000048 GO:0005515
Aed1g0658 1182 MobiDBLite consensus disorder prediction 1 16 - -
Aed1g0658 1182 Pfam Myosin head (motor domain) 189 835 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed1g0658 1182 MobiDBLite consensus disorder prediction 1 70 - -
Aed1g0658 1182 Gene3D - 370 426 - -
Aed1g0658 1182 Gene3D - 781 848 - -
Aed1g0658 1182 Gene3D Kinesin motor domain 186 780 IPR036961 -
Aed1g0658 1182 MobiDBLite consensus disorder prediction 17 35 - -
Aed1g0658 1182 PANTHER MYOSIN-2 ISOFORM X1 120 1180 - -
Aed1g0658 1182 MobiDBLite consensus disorder prediction 931 964 - -
Aed1g0658 1182 Gene3D - 853 899 - -
Aed1g0658 1182 Coils Coil 970 1018 - -
Aed1g0658 1182 Pfam IQ calmodulin-binding motif 853 869 IPR000048 GO:0005515
Aed1g0658 1182 Pfam IQ calmodulin-binding motif 911 928 IPR000048 GO:0005515
Aed1g0658 1182 Pfam IQ calmodulin-binding motif 876 892 IPR000048 GO:0005515
Aed1g0658 1182 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 134 183 IPR004009 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0658 Aed-Chr1 7876952 7886854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0658 1 1176 Myosins gene family AT5G54280 62.021 0.0 1531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0658 K10357 - gmx:100819335 2013.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0658 1 7876952 7886854 Aed1g0658 1 7876952 7886854 ECH