Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0655 ATGAACGGAAAGGCCAGTGTTTCCAAAGAACTCAACGCCAAGCACAAAAAGATACTGGAAGGACTTCTTAAATTGCCAGAGAATAGGGAATGCGCTGACTGCAAAGCTAAAGGTCCAAGATGGGCTAGTGTAAATCTTGGCATCTTTATATGCATGCAGTGTTCAGGAATACATCGAAGTTTGGGGGTACATATATCAAAGGTTCGTTCTGCAACCCTGGACACTTGGCTTCCAGAGCAAGTTGCATTCATTCAATCAATGGGAAACGAGAAAGCAAATTGTCATTGGGAAGCAGAATTACCTCCAAATTATGATAGAGTTGGAATTGAGAATTTCATTCGTGCAAAGTATGAGGAGAAGAGATGGGTTCCAAGAGATGGGAATACAAAAACACCTTCTGGATTGCAGGAAGAGAAAAGTCCTTCACGTTGGCAGAGGCCTGTGGAGAGAAGTGATTATGCTGCTGTTTCTGAGAATACATTTGAGGAAAGGAAGAAAATCCAGTCATCAAATGCAATTCCTACCACAAGAATTAATGTTCCTGCTCCTCCCAGAGCACCTGAGCAGGTAACTCCTATTACCAGACCTCAGCATGTGGAGAAAGTGGAACCAGTAGCACCCCAACCACAAGCTGAAAAACCAAAGCAGGCTACAGACACAGTTCAAAACACCCCTCCAAAAGTTGACTATGCTACAGACCTTTTCAACATGTTGTCTATGGATGGCCCCAATGAAAATGGCTCTGTGGCAGCTGGTACAACTACTGATGATAATCACTGGGCAGGTTTTCAGTCTGCTGCAGAGGTGTCAACAGCTGAGAAGATTAGTCCGCTGAAAGCGGCAGATAGTACTCCAGCTTCTGCATCTGGAATTGAGGATCTTTTTAAAGATTCACCTACTGTGACACCAAGCTTGACTCCACAGAAAGATGTGAAAAATGATATCATGAGCCTCTTTGAGAAGGGCAATATGGTGTCTCCATTTTCTATGCATCAACAGCAGCTTGCCACGCTAGCACAGCAACAGTCTCTTCTAATGGCTGCTGCAGCAGCTAAATCTACTGGTGGGGATCCCAGGTATCCTGCTAGCATACAACAACCTAGACCAAATGTTCCTATCCAAAGTTGGCCAGCTACTGGCTACTCGATTCCTGGAGTAATGCCCATGGGTGGTCAGATTCAGGGTCAGACTAGGAATATGACCCCAGCACATTTTGCAGGAAGCTCTGTTCAATACCCGCCATCCAGTTTCTATGGTATGGGACAAGTTCCTCCTCCAGTTAATGGCATGATAGAAGTGAGTAAACCTCAGTCAGGAGGAGGTCCAGTATCATCTACCACTTCACAGACTGCGAAGAAGGATTATGATTTTTCCTCCTTAACACGTGGGATGTTTACGAAACAGTGA 1407 0.4485 MNGKASVSKELNAKHKKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANCHWEAELPPNYDRVGIENFIRAKYEEKRWVPRDGNTKTPSGLQEEKSPSRWQRPVERSDYAAVSENTFEERKKIQSSNAIPTTRINVPAPPRAPEQVTPITRPQHVEKVEPVAPQPQAEKPKQATDTVQNTPPKVDYATDLFNMLSMDGPNENGSVAAGTTTDDNHWAGFQSAAEVSTAEKISPLKAADSTPASASGIEDLFKDSPTVTPSLTPQKDVKNDIMSLFEKGNMVSPFSMHQQQLATLAQQQSLLMAAAAAKSTGGDPRYPASIQQPRPNVPIQSWPATGYSIPGVMPMGGQIQGQTRNMTPAHFAGSSVQYPPSSFYGMGQVPPPVNGMIEVSKPQSGGGPVSSTTSQTAKKDYDFSSLTRGMFTKQ 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0655 468 CDD ArfGap 19 117 - -
Aed1g0655 468 Gene3D Arf GTPase activating protein 2 130 IPR038508 -
Aed1g0655 468 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Aed1g0655 468 PANTHER ARF GTPASE ACTIVATOR 1 468 - -
Aed1g0655 468 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Aed1g0655 468 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Aed1g0655 468 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Aed1g0655 468 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
Aed1g0655 468 MobiDBLite consensus disorder prediction 438 455 - -
Aed1g0655 468 MobiDBLite consensus disorder prediction 203 226 - -
Aed1g0655 468 MobiDBLite consensus disorder prediction 124 149 - -
Aed1g0655 468 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 468 IPR044520 GO:0005096
Aed1g0655 468 Pfam Putative GTPase activating protein for Arf 17 123 IPR001164 GO:0005096
Aed1g0655 468 MobiDBLite consensus disorder prediction 433 455 - -
Aed1g0655 468 SMART arf_gap_3 16 130 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0655 Aed-Chr1 7852148 7857082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0655 16 123 C2H2 Transcription Factor Family AT4G05330 48.276 5.44e-29 115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0655 1 7852148 7857082 Aed1g0655 1 7852148 7857082 ECH