Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0637 ATGGATCATCGTCATAATCAAGAGATGGCAGACATAGAATCTCAAACTGTTGAAACTCACAAAGGAAAACGTCAGGTCATTCTTAAGTTTGACGATGTTGTGTATAAAATCAAGACCAAGAAAGGTGGACTGTTTGGGAAGAACAAAGTAGAAGAGAAACACATACTGAAGGGAGTGACAGGTGTTGTTGAGCCAGGTGAAATGCTAGCCATGTTAGGTCCATCTGGGAGTGGCAAAACAACTCTTCTCACAGCATTGGGTGGAAGGCTTGGAGCGAAGCTTAATGGAAGTATAACCTACAATGGTGAAGCCTTCTCAAACAAAATGAAGAGGAACACCGGCTTTGTCACACAGGATGATGTTCTCTACCCCCACTTGACTGTGACTGAGACCCTAGTCTTCACAGCACTTCTCAGATTGCCGAATACTCTCTCCAAAGAAGACAAAGTTAAGCAAGCAAGAGATGTCATTGATCAACTTGGTTTAACCAAGTGCAAGGACAGCATAGTTGGAAGCCCTTATTTGAGAGGGGTTTCTGGTGGAGAGAGGAAGAGGGTTAGCATTGGTCAAGAACTGCTCATAAACCCAAGCTTGTTATTTCTTGATGAACCTACCTCTGGCCTTGACTCAACCACAGCACAGAGAATTGTCTCAACCTTGTGGGAGCTTGCAAGTGGTGGTGGCAGAACTGTTGTCATGACAATTCACCAACCTTCAAGTAGGCTTTACTACTTGTTCCATAAGGTGCTGCTGCTATCAGAAGGGAACTTATTGTACTATGGAAAAGGATCTGAAGCCATTGAGTACTTTTCTAATATTGGATATGCCCCAGCATTGGCCATGAACCCTGCTGACTTCCTTTTGGATCTTGCAAATGGTATTCACACTGATGAGTTTAATGAGGATCATGCCATAGATAAACAGAACTTGATTACGGTGTATAAGAGAAACTATGCTGCAGAGTTGAAGCCAGCACTTCAAGGAATCAATGACTCTGGTAAAAGCCAGAATAGATTTCAAGAAAAGGAAAAATGGCCTACCACCTGGTCACAACAATTCTATGTGCTGTTAAGAAGAGACATCAAAGAGAGAAAGCATGAATCCTTCTCTGCTATGCGGGTTGGTCAGGTCCTTGTGGTTGCTCTTATCTCAGGACTGCTGTGGTACAAGTCCGATATCTCACACTTGCAGGATCAGATTGGGCTTCTATTCTTCATATCTGGCTTTTGGGGTTTCTTCCCTCTCTTCCAAGCAATATTCACATTCCCTCAAGAGCTACTGATGCTAGAGAAAGAAAGATCTTCAGGAATGTATAGGCTATCCTCCTACTTCATGTCAAGGGTAGTAGCTGATCTTCCAATGGAGCTCATTCTCCCCATCATATTCATTCTCATAACCTATTGGATGGCAGGGTTGAAAGCCAACATTCTCAACTTCTTCTACACAATGCTCGCCCTCCTGCTCCATGTCCTTGTCGCGCAAGGCATGGGACTCGCCCTTGGAGCCTCTGTGATGGATCAAAAGGCCGCCACCACGCTCGCATCGGTCATCATGCTGTCCTTCTTGCTGGCTGGTGGATTCTATGTTCAGCATGTTCCAACGTTCATCTCTTGGGTCAAGTACATTTCTCTCAGCTACTACAACTACAAGCTCTTTATAGCTTCTCAGTATGGCTCTGGTGACACATACCCCTGCTCTTCTAACAGTAGTGGCCAGTGCTATGTTGCGGAGTTTTCTTCTATAAAGCTAACAGGGCTTCACTTTCATCTGAACGAGAATATCATGGCTGCTTCTGTTCTTGTGATCATGATGATTGGTTACAGAATCATAGCCTATGTTGCTCTCATGAGAATTGGAGTCACAAAGAAATAG 1872 0.4407 MDHRHNQEMADIESQTVETHKGKRQVILKFDDVVYKIKTKKGGLFGKNKVEEKHILKGVTGVVEPGEMLAMLGPSGSGKTTLLTALGGRLGAKLNGSITYNGEAFSNKMKRNTGFVTQDDVLYPHLTVTETLVFTALLRLPNTLSKEDKVKQARDVIDQLGLTKCKDSIVGSPYLRGVSGGERKRVSIGQELLINPSLLFLDEPTSGLDSTTAQRIVSTLWELASGGGRTVVMTIHQPSSRLYYLFHKVLLLSEGNLLYYGKGSEAIEYFSNIGYAPALAMNPADFLLDLANGIHTDEFNEDHAIDKQNLITVYKRNYAAELKPALQGINDSGKSQNRFQEKEKWPTTWSQQFYVLLRRDIKERKHESFSAMRVGQVLVVALISGLLWYKSDISHLQDQIGLLFFISGFWGFFPLFQAIFTFPQELLMLEKERSSGMYRLSSYFMSRVVADLPMELILPIIFILITYWMAGLKANILNFFYTMLALLLHVLVAQGMGLALGASVMDQKAATTLASVIMLSFLLAGGFYVQHVPTFISWVKYISLSYYNYKLFIASQYGSGDTYPCSSNSSGQCYVAEFSSIKLTGLHFHLNENIMAASVLVIMMIGYRIIAYVALMRIGVTKK 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0637 623 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 28 279 IPR003439 GO:0005524
Aed1g0637 623 Pfam ABC transporter 56 206 IPR003439 GO:0005524
Aed1g0637 623 ProSitePatterns ABC transporters family signature. 178 192 IPR017871 GO:0005524
Aed1g0637 623 SMART AAA_5 65 264 IPR003593 -
Aed1g0637 623 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 15 619 - -
Aed1g0637 623 Pfam ABC-2 type transporter 351 557 IPR013525 GO:0016020|GO:0140359
Aed1g0637 623 Gene3D - 45 273 IPR027417 -
Aed1g0637 623 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 15 619 - -
Aed1g0637 623 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 272 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0637 Aed-Chr1 7715028 7718544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0637 55 293 Calmodulin-binding Proteins AT2G36910 27.419 3.02e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0637 K05681 - gmx:100816135 1036.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0637 1 7715028 7718544 Aed1g0637 1 7715028 7718544 ECH