Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed1g0614 | ATGTTTTATAACTCCAAACACAGACTCTATCGCCAGGTCTCGAGCCGGGGTCTCCGGATCGGGGGCTGCGAGCGGCTCGGGGAAAGGGTCGCCAGCGGAGGTATCGGCGGCGACGTCGAGGGAGAAGAAATCGACGGTTGCGGTGGTGGGGGAGGCGCGTTGGGGCGTTTCGAGGGAAATTTCGTTGCGGAAAACGGTGTAGGATTCGGGGTGGTCGGAGAGTGGGGAATCGGCGGCGGAGAGAGCGAGGGGACTTATAGTGTCGTAAACGATGTGTTATTCTTCATCCTACACCAAATTCTCCACGGGTTGTTCTTCTGGCTAATGGAAATGAGGCCAAATGAACACGATATTGAAGAGGGTAATTATGGGGACTTTGATCCATCTCATCATGTTACAATCTTTCATGCTTTTGTACACAGAAATTTGCATGGTTTGGCATTTGTGACTGCATTTGAAAGAGTTTTTGAAGAGAAAAGAGGACAAAGACTTAGAGATCGCAAGAAATTGCCACCTTTGGTGAAATATGGAATGCATGGTGTCACAAGAAGTTGTGGTGAATGTGCCATTTGCATAGATGAATTCCGAGTTGGCCAATTTTGTCAAGTTTTTCCTGGGTGCAAGCACATTTTTCATTCCAATTGCATAGACCACTGGTTGCAGAAGAAATCAACTTGTCCAATATGTCGTAGTTGTATATAG | 702 | 0.4744 | MFYNSKHRLYRQVSSRGLRIGGCERLGERVASGGIGGDVEGEEIDGCGGGGGALGRFEGNFVAENGVGFGVVGEWGIGGGESEGTYSVVNDVLFFILHQILHGLFFWLMEMRPNEHDIEEGNYGDFDPSHHVTIFHAFVHRNLHGLAFVTAFERVFEEKRGQRLRDRKKLPPLVKYGMHGVTRSCGECAICIDEFRVGQFCQVFPGCKHIFHSNCIDHWLQKKSTCPICRSCI | 233 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed1g0614 | 233 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 153 | 233 | IPR013083 | - | |
Aed1g0614 | 233 | Pfam | Ring finger domain | 187 | 230 | IPR001841 | - | |
Aed1g0614 | 233 | PANTHER | - | 91 | 233 | - | - | |
Aed1g0614 | 233 | ProSiteProfiles | Zinc finger RING-type profile. | 188 | 230 | IPR001841 | - | |
Aed1g0614 | 233 | SUPERFAMILY | RING/U-box | 187 | 233 | - | - | |
Aed1g0614 | 233 | SMART | ring_2 | 188 | 229 | IPR001841 | - | |
Aed1g0614 | 233 | CDD | RING-H2_PA-TM-RING | 187 | 230 | - | - | |
Aed1g0614 | 233 | PANTHER | RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED | 91 | 233 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed1g0614 | Aed-Chr1 | 7487269 | 7489485 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed1g0614 | 157 | 231 | C3H Transcription Factor Family | AT2G18670 | 46.667 | 7.64e-17 | 73.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed1g0614 | - | - | gmx:102660073 | 249.595 |