Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0614 ATGTTTTATAACTCCAAACACAGACTCTATCGCCAGGTCTCGAGCCGGGGTCTCCGGATCGGGGGCTGCGAGCGGCTCGGGGAAAGGGTCGCCAGCGGAGGTATCGGCGGCGACGTCGAGGGAGAAGAAATCGACGGTTGCGGTGGTGGGGGAGGCGCGTTGGGGCGTTTCGAGGGAAATTTCGTTGCGGAAAACGGTGTAGGATTCGGGGTGGTCGGAGAGTGGGGAATCGGCGGCGGAGAGAGCGAGGGGACTTATAGTGTCGTAAACGATGTGTTATTCTTCATCCTACACCAAATTCTCCACGGGTTGTTCTTCTGGCTAATGGAAATGAGGCCAAATGAACACGATATTGAAGAGGGTAATTATGGGGACTTTGATCCATCTCATCATGTTACAATCTTTCATGCTTTTGTACACAGAAATTTGCATGGTTTGGCATTTGTGACTGCATTTGAAAGAGTTTTTGAAGAGAAAAGAGGACAAAGACTTAGAGATCGCAAGAAATTGCCACCTTTGGTGAAATATGGAATGCATGGTGTCACAAGAAGTTGTGGTGAATGTGCCATTTGCATAGATGAATTCCGAGTTGGCCAATTTTGTCAAGTTTTTCCTGGGTGCAAGCACATTTTTCATTCCAATTGCATAGACCACTGGTTGCAGAAGAAATCAACTTGTCCAATATGTCGTAGTTGTATATAG 702 0.4744 MFYNSKHRLYRQVSSRGLRIGGCERLGERVASGGIGGDVEGEEIDGCGGGGGALGRFEGNFVAENGVGFGVVGEWGIGGGESEGTYSVVNDVLFFILHQILHGLFFWLMEMRPNEHDIEEGNYGDFDPSHHVTIFHAFVHRNLHGLAFVTAFERVFEEKRGQRLRDRKKLPPLVKYGMHGVTRSCGECAICIDEFRVGQFCQVFPGCKHIFHSNCIDHWLQKKSTCPICRSCI 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0614 233 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 153 233 IPR013083 -
Aed1g0614 233 Pfam Ring finger domain 187 230 IPR001841 -
Aed1g0614 233 PANTHER - 91 233 - -
Aed1g0614 233 ProSiteProfiles Zinc finger RING-type profile. 188 230 IPR001841 -
Aed1g0614 233 SUPERFAMILY RING/U-box 187 233 - -
Aed1g0614 233 SMART ring_2 188 229 IPR001841 -
Aed1g0614 233 CDD RING-H2_PA-TM-RING 187 230 - -
Aed1g0614 233 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 91 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0614 Aed-Chr1 7487269 7489485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0614 157 231 C3H Transcription Factor Family AT2G18670 46.667 7.64e-17 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0614 - - gmx:102660073 249.595