Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0581 ATGTCTACCAGAGACATCCTTCAGAAGATGAAGGTAAAAGTTGGTTTGGGTTCATCAGACACTGATTCAGGGAAAGGAAAGAGCAAGATGTCAAAGAACATAACTCATGGCTTTCATTTGGTGAAAGGAAAATCATATCATGACATGGAGGACTACGTTCCTGACTTCTGGAAAGAGCCTGCAGATGCTGTCAAGAGAGCATATGATAAAACTGATTCTAATATCTTAGAGATGTCGGGTGAATTAGGTAGAGGGGGTTCAACTGCTGTTACAGCAATATTAGTCAATTGTCAGAAGTTAATAGTAGCCAACATTGGCGATTCTCGGGCCGTCTTATGCAAGAAGGGGGATGTTCCTCGTGTTGATGGACGGTTGGCAGTGTCAAGGGCATTTGGTGACAAAAGCTTGAAGAAACACTTGAGTTCAGAGCCATTTGTGACAGTGGAGATTATAGATGATGGTGCAGAGTCTGTTATACTAGCCAGTGATGGATTATGGAAGGTAATGTCAAATCAAGAAGCAGTTAATTGTATCAGAAATATAAAGGATGCAAGGTCTTCAGCCAAGCGCCTTACTGAAGAAGCAGTTAACAGGAAAAGCACCGATGATATCTCCTGCATTGTTGTGAAATTTCAGTGA 639 0.4163 MSTRDILQKMKVKVGLGSSDTDSGKGKSKMSKNITHGFHLVKGKSYHDMEDYVPDFWKEPADAVKRAYDKTDSNILEMSGELGRGGSTAVTAILVNCQKLIVANIGDSRAVLCKKGDVPRVDGRLAVSRAFGDKSLKKHLSSEPFVTVEIIDDGAESVILASDGLWKVMSNQEAVNCIRNIKDARSSAKRLTEEAVNRKSTDDISCIVVKFQ 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0581 212 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 117 212 - -
Aed1g0581 212 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 54 117 - -
Aed1g0581 212 Pfam Protein phosphatase 2C 40 117 IPR001932 -
Aed1g0581 212 Pfam Protein phosphatase 2C 119 204 IPR001932 -
Aed1g0581 212 ProSiteProfiles PPM-type phosphatase domain profile. 16 211 IPR001932 -
Aed1g0581 212 PANTHER PROTEIN PHOSPHATASE 2C 1 53 IPR015655 GO:0004722|GO:0006470
Aed1g0581 212 PANTHER PROTEIN PHOSPHATASE 2C 54 117 IPR015655 GO:0004722|GO:0006470
Aed1g0581 212 CDD PP2Cc 58 211 IPR001932 -
Aed1g0581 212 Gene3D - 118 212 IPR036457 -
Aed1g0581 212 PANTHER PROTEIN PHOSPHATASE 2C 117 212 IPR015655 GO:0004722|GO:0006470
Aed1g0581 212 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 53 - -
Aed1g0581 212 SMART PP2C_4 12 209 IPR001932 -
Aed1g0581 212 SUPERFAMILY PP2C-like 52 211 IPR036457 -
Aed1g0581 212 Gene3D - 16 117 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0581 Aed-Chr1 7280438 7284909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0581 1 212 PP2C-type Phosphatase Gene Family AT3G15260 54.325 3.79e-99 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0581 K17506 - gmx:100500617 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0581 1 7280438 7284909 Aed1g0581 1 7280438 7284909 ECH