Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0580 ATGGTGGGCTCAGGAGTATCTGCAGATAGGAGCAGCAAAGAAGCTGTTGGGATGATGGCCCTTCATGAGGCCCTCAGAAGAGTCTGTCTCAACTCTGACTGGACTTACTCTGTCTTCTGGACCATTCGTCCTCGCCCGAGAGTCCGAGGTGGTAATGGCTGCAAGGTTGGAGATGATAGCGGCAGCTTGATGTTGATGTGGGAAGATGGGTATTGCGAAGGAAGGGGTGCATCAGGATGTCTGGAAGATATTGATGGAGAGGATCCAGTCAGAAAGGCCTTCAGCAAAATGTCCATTCAGTTGTATAATTATGGAGAAGGGTTGATGGGGAAAGTTGCTTCTGATAAGTGCCACAAGTGGGTCTTTAAAGAGCCCACAGAATGTGAACCCAATATCTCCAACTACTGGCAGAGCTCCTTTGATGCTCTTCCTCCTGAATGGACAGATCAGTTTGAGTCAGGCATTCAGACCATAGCTGTTATTCAAGCTGGGCATGGCCTTCTCCAACTTGGTTCTTGCAAGATTATTCCTGAAGACCTCCATTTTGTGCTAAGGATGAGACACACATTTGAATCCCTTGGCTACCAATCTGGTTTCTACCTCTCACAACTCTTCTCTTCAACAAGGAACACTTCCTCATCAACTTCCATTCCTTCAAAACCATCATCCACCATTCCAATAAGGCCACCTCCTCCACTCTTCAACTGGGGTCAGAGGCCACTTTCTTCATCCGCCACTAATAACTCCATGCTATCATCCTCACCCAATTTCCAACAACATGCACAGGCACACATGTTTCTCATGCCTCATCATCATCATCATCATCATCATCATCATGCATCATCATCATCCGAGAGTGCAAGAATCGAGGACATGAACATGATGGTGGGGGAGCATCAGCAGCAGCAGCATGAAAACGACATCAAATGGCCTAATGGCTTGTCTTTCTTCAATGCTCTCACTGGAAGAACAGATCATGATACTAAGCTTTTGTTCAATCCTGATGGCTTGGGGAACAATCCTGAGCACCAATCTCTTAGCCAAAACCCCAATTCAGATGGCTCCAACATCATGCAAAATTCTAGTGGTGGAGCCAACACAAATGAGTTCTTGAGCTTGGATAATAATAGTCACCAAGAAGATCATGCAAGGAAAATGGACAAGTATAAGAGAAGTTTCACTCTTCCTGCAAGAGTTGCCTCATCATCTTCATCCACTTCAATGGATCAACAACACCAACAACAAGGTTTGGAGTATAGGAATTCAGAAGGAGGTATGTACCCGGATGTCATGGAAACCTTTTTGGAGTGA 1311 0.4561 MVGSGVSADRSSKEAVGMMALHEALRRVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDSGSLMLMWEDGYCEGRGASGCLEDIDGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSIPSKPSSTIPIRPPPPLFNWGQRPLSSSATNNSMLSSSPNFQQHAQAHMFLMPHHHHHHHHHHASSSSESARIEDMNMMVGEHQQQQHENDIKWPNGLSFFNALTGRTDHDTKLLFNPDGLGNNPEHQSLSQNPNSDGSNIMQNSSGGANTNEFLSLDNNSHQEDHARKMDKYKRSFTLPARVASSSSSTSMDQQHQQQGLEYRNSEGGMYPDVMETFLE 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0580 436 MobiDBLite consensus disorder prediction 237 253 - -
Aed1g0580 436 MobiDBLite consensus disorder prediction 397 420 - -
Aed1g0580 436 MobiDBLite consensus disorder prediction 338 372 - -
Aed1g0580 436 MobiDBLite consensus disorder prediction 397 428 - -
Aed1g0580 436 PANTHER GB|AAF34833.1 1 436 IPR044170 -
Aed1g0580 436 MobiDBLite consensus disorder prediction 210 253 - -
Aed1g0580 436 MobiDBLite consensus disorder prediction 330 372 - -
Aed1g0580 436 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 21 190 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0580 Aed-Chr1 7271780 7275019 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0580 22 222 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 32.020 5.10e-21 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0580 - - gmx:100814723 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0580 1 7271780 7275019 Aed1g0580 1 7271780 7275019 ECH