Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0579 ATGGCTGATGTGACTGGTCTAGTTGAGGCATCAGGAACAAGATTCAGTTCATTGGAACAAATTGGGCAGGGATCATTCGGAGACGTCTATAAAGCGTTTGACAGAGAGCTTAACAAAGAAGTTGCGATCAAAGTAATCGATTTGGAAGAATCAGAGGATGAAATTGAGGATATCCAGAAGGAAATTTCTGTTTTGTCCCAATGTCGATGTCCATACATTACTGAATATTATGGTTCCTATATCAATCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGTGGCTCAGTTGCTGATCTACTCCAATCAGGTCCTCCCCTTGATGAAATGTCAATTGCTTGCATTCTACGTGACTTGCTGCATGCTGTTGATTATCTACACAGTCAAGGAAAAATTCATAGAGACATTAAAGCTGCAAACATTTTATTGTCAGAGAATGGTGATGTAAAGGTTGCAGATTTTGGTGTTTCTGCACAATTAACGAGGACTATATCAAGGAGAAAGACATTTGTAGGAACACCATTCTGGATGGCACCTGAGGTTATTCAGAATACGGATGGATATGATGAGAAGGCAGATATATGGTCCTTGGGAATCACTGCAATTGAGATGGCAAAGGGGGAGCCTCCACTTGCTGATCTTCACCCGATGAGAGTGCTTTTCATCATACCCCGAGAGACTCCTCCACAGAGGTTAAGTGCTAAGGAACTTCTCAAGGACCGTTTTATTCGGAATGCTAGGAAGAGTTCAAAGCTTTCAGAAAGAATAAGGGAGCGTCCGAAGTACCAAATAAAGGAGGAAGATCAGGAAACACCCAGAAATGTTTCAAGTGGGATGGGCGAGGCATCAGGTACTATAAAGGTGGCAAGAGATTTGAGAGGTGAAGAAAATAATCGACCCAGTGATCAGGGTAAAACCCTGAAAAGTGCTGGATGGGACTTCAGCATTGGTGGATCACAGGGTACTGGAACCTTTCGTAATGTTTCTCGACCACCTCACTCTAGAGATAAGAAAACTGAAGTTTCACACAATCAGCTTACCCAAAGAAAAGCTCCAGAGAGTGGTTATCAAGGGGGATCTGTCAATAGAAGTGCACTTAATGAGTCAGTTGAAAGTTCCTTTGGAAGAAATCTTAGAGTTCCCCACCATGATGAGCATCTGGATAATCACCTTGAAGATGATGAATCACCTGGGAATGAATCAGGAACTGTTGTTATTCGATCTCCAAAAGGATCAAGGTCATCTGCGATTCGTGACCAGAGCTTTCAGCCTAGCAGCAGTTATGATGCTTTTGATGATGCTTCTTCAAGTGGAACTGTTGTTTTACATGGCCAGCATGATGAGCCTGATTCTCCACAGACACCTAGATCTCGCCTGGGACTTAATGACAGAAATTCAAATGCCTCAATGGAAGATAGTGCAGCAAATCTTGCGGAGGCAAAGGCTGCTATCCTGAGGAAATCAAATGCTAGAGAGAGACTTGCCCGGGGAAAAATCAACAATAATAGACAGGAAAGCAAGAAAGATCATAAGGCTAGCAGCTCTGATTCTTCAAGATCACATGGTGAATATGATACATACAAGGGCATGTTAAGATCACATCATTCTAGTGATGAAAGAGAAAGTGCTAAAGTAATGTCATCGTCAGTGCCATTGTCTGTTTTACTTATTCCTTCATTAAAAGAGGCCATTGCTGATGATCCAGAAGGGTTAATCGCAAGGGCAGTTATCAATTCTTTTATAAATATGGAGGCTGCAAAACCTAAATCCTGTGATGTTCTTCTCAAAAAGTTGCTTCAGCGATTGGCAAGTTCAAAGGAAGATTCATTGAAGGACCTGCAGGGACTAGCAGGCCAGTTATTCGAAACCCGAAATGCAGATGCTGATAACAGGAATAAACAACAAAACAAGAAACATCATCCAAATAGCAATTTAAGCCCACTTGCTAGATTTCTTCTCTCAAGATGGCAAGGCCAAACCTCACGGGATCTTAACCCATCTTGA 2007 0.4185 MADVTGLVEASGTRFSSLEQIGQGSFGDVYKAFDRELNKEVAIKVIDLEESEDEIEDIQKEISVLSQCRCPYITEYYGSYINQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILRDLLHAVDYLHSQGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNTDGYDEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRETPPQRLSAKELLKDRFIRNARKSSKLSERIRERPKYQIKEEDQETPRNVSSGMGEASGTIKVARDLRGEENNRPSDQGKTLKSAGWDFSIGGSQGTGTFRNVSRPPHSRDKKTEVSHNQLTQRKAPESGYQGGSVNRSALNESVESSFGRNLRVPHHDEHLDNHLEDDESPGNESGTVVIRSPKGSRSSAIRDQSFQPSSSYDAFDDASSSGTVVLHGQHDEPDSPQTPRSRLGLNDRNSNASMEDSAANLAEAKAAILRKSNARERLARGKINNNRQESKKDHKASSSDSSRSHGEYDTYKGMLRSHHSSDERESAKVMSSSVPLSVLLIPSLKEAIADDPEGLIARAVINSFINMEAAKPKSCDVLLKKLLQRLASSKEDSLKDLQGLAGQLFETRNADADNRNKQQNKKHHPNSNLSPLARFLLSRWQGQTSRDLNPS 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0579 668 MobiDBLite consensus disorder prediction 251 362 - -
Aed1g0579 668 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 232 666 - -
Aed1g0579 668 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 231 - -
Aed1g0579 668 MobiDBLite consensus disorder prediction 331 345 - -
Aed1g0579 668 MobiDBLite consensus disorder prediction 402 443 - -
Aed1g0579 668 MobiDBLite consensus disorder prediction 625 646 - -
Aed1g0579 668 MobiDBLite consensus disorder prediction 289 303 - -
Aed1g0579 668 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 1 231 - -
Aed1g0579 668 MobiDBLite consensus disorder prediction 456 473 - -
Aed1g0579 668 MobiDBLite consensus disorder prediction 251 273 - -
Aed1g0579 668 CDD STKc_MST3_like 14 264 - -
Aed1g0579 668 SMART serkin_6 15 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g0579 668 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Aed1g0579 668 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 232 666 - -
Aed1g0579 668 MobiDBLite consensus disorder prediction 388 473 - -
Aed1g0579 668 MobiDBLite consensus disorder prediction 489 546 - -
Aed1g0579 668 ProSiteProfiles Protein kinase domain profile. 15 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g0579 668 SUPERFAMILY Protein kinase-like (PK-like) 14 267 IPR011009 -
Aed1g0579 668 Pfam Protein kinase domain 16 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g0579 668 Gene3D Transferase(Phosphotransferase) domain 1 11 280 - -
Aed1g0579 668 MobiDBLite consensus disorder prediction 346 362 - -
Aed1g0579 668 MobiDBLite consensus disorder prediction 314 330 - -
Aed1g0579 668 MobiDBLite consensus disorder prediction 489 543 - -
Aed1g0579 668 Coils Coil 41 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0579 Aed-Chr1 7253439 7261175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0579 1 665 MAP Kinase Kinase Kinase Kinase AT3G15220 61.295 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Aed1g0579 Pkinase 1.4e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0579 K08838 - gmx:100815042 1126.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0579 1 7253439 7261175 Aed1g0579 1 7253439 7261175 ECH