Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0568 ATGCGATCATCGCCGTCTTCATTGGGTTCCTCGTCTCGATCGGGTTCGCGGCTTCGGAAGAAACACAAGAGGTTGGATGCAATATGTGAGGATGAGTACACTCGAAACCATGTTGAGGTCAATGAGGATATTGATGATTGGAACCCTGATGCCGGGGTTCGTCGAAGCTCTCGAGTTCGCCGTGCCCCGCAGTTGCTCGACGCCTCTCCCGCTCCGCCGAAGAAACGGCGGAAGGTGGGGCAGGGTGGAATTGGTCGGGGTGTGGAGGGTGCTAGGAGTTTAGGGCGGGAAAATAAACGTTCTGGCGGGGCTTGGAGTTCTAGGTTGAGATCAAGAGTTGGCAATGCAGGTGTTAGGATGAAACAGGAGAGTGATTCGCCACGTGGGAAGAGGAAGCTTTTTGTGGCTGCAGTTGGAACGAGGGGTGATGATGAGGTTGGTGGGAAAGAGGAATTGGGAGGTTTGATGCCGAAAGTGGTTAAGTCGAAGAGACCGGGGAGGATTAAAGCCACGAAGCATGAGGAGGGGCATGAAGAGGATGTGTCTCATGGGAGTTTGGAGGAGAGTAAGAGTCAGGAAGTGGACAGTGTGTTGAGTAGTGATGAGGAGAGTGATTCTGATCCGGAAACCGAATTGTCGGGAGAGGATCAGATGGATGATTCGGATGGAGATGCCTCTCCTGTGATAGGGAGTGAGGAGGGGGATCAGATGGATGATTCGGATGGAAATTCCTCTCCTGTGATAGAGAGTGAGGAGGGGGATCAGTTGGATGATTCGGATGGAGATAACCTTCCTATGAGAGGGAATGAGGAGGGAGATCAGATGGATGATTTGGATGAAAATGACCCTCCAGTGGTAGGCAATGAGGAGAAGAACTTATCCAATGATTTGCAAATAGATGAATGTGGTGGCAATGTTGAACTGTCTCCAGTGGAACATGTAGATAAAGTGGACGATCAGTTAGAGAGTGTGAAGGAAAGCAAAAGTGTCGGTGATGTAGCTGAACTGGTAGATAATGAAGGATCCATTGGTAAAGAGGTTGATGTTGACAGTAATGTCTCAAAAGATGCAAATGATAGTAAGGAGGTTGATGTTGATGAAGATGTCTTGAAAGATTCAAATGTTGGAAGGACGGACGAGTTGAAACGTGCTTCAATTGACAAGCGTGCTCACCAGCGGATCAAAGAGGGCAGGCGGTGTGGTTTGTGTGGTGTAGGGAGCGATGGTAAGCCTCCAAAAAGGTTAGCTCAGGATAATGGTGAAAGTGAGAATGAAGCTTATAGTGGATCCTCATCTTCAGAGGAGACTAATTATGATATCTGGGATGGTTTTGATGATGAACCTGGCTGGCTTGGGCGTCTCTTGGGTCCTATTAATGATCACTATGGTATTGCTAGAATATGGGTTCATCTGCACTGTGCAGTATGGAGTCCAGAGGTTTATTTTGCTAACTTTGGGTGCTTAAAAAATGTGAGGGCTGCACTTGTCCGAGGAAGAGCATTGAAGTGCACACGCTGTGGGAGGCGAGGGGCAACCACTGGTTGTCGCGTCGATCGTTGTCCAAGAACTTATCACTTGCCTTGTGCAAGAGCAAGTGGTTGCATCTTTGATCATCGTAAATTTCTTATAGCTTGCACAGATCATCGGCATCTCTTCCAACCTCGTGGTAATAAATATTTAGCCCGGATAAAGAAGTTGAAGGCTAGGAAAATGATGTGGGAGATAAGGAAGAGATCAAATGAAGCTTGCAGAAAAGATATTGGAGATGAAGAGAGATGGTTGGAAAATTGTGGAGAGGATGAAGAATTTTTGAAACGTGAGAACAAGAGGCTTCATCGTGATTTACTGAGAATAGCCCCCGTGTACATTGGGGGTTCAGAATCTGCCAGTGAAAACTCATTTCAAGGATGGGAATCTGTTGCTGGGCTTAAAGATGTCATCCGTTGTATGAAAGAAGTTGTTATTTTACCTCTGCTATATCCTGAGCTCTTTGATAATTTAGGGCTTACACCTCCGAGAGGTGTTCTTTTGCATGGACATCCTGGAACAGGGAAAACCTTGGTGGTCCGCGCATTGATAGGTGCATGTTCCCGAGGTGATAAGCGGATTGCATATTTTGCCCGTAAAGGTGCAGATTGCTTGGGGAAGTATGTTGGTGATGCGGAGCGTCAACTAAGACTATTATTTCAGGTTGCTGAGAAATGTCAACCTTCTATAATATTCTTTGATGAAATAGATGGGCTGGCACCCACCCGCACTAGGCAGCAAGATCAGACACATAGTTCTGTTGTGTCAACATTGCTTGCTCTTATGGATGGTTTGAAATCTAGGGGTTCAGTTGTGGTCATAGGTGCAACGAACCGTCCTGAAGCTGTTGACCCAGCGCTTAGGCGCCCTGGTAGATTTGATCGGGAAATTTATTTTCCATTACCATCTATTGAGGACAGAGCTTCCATTCTCTCACTTCACACCCAGAAGTGGCCAAAACCAATTACCGGATCCTTACTTCAGTGGATTGCAAGAAAAACACCTGGCTTTGCTGGTGCTGATCTCCAGGCTCTTTGTACCCAAGCAGCGATGAATGCGTTGAAGAGGAATTTCCCTTTGCATGAAGTCCTGTCTTTAGCTGCTGAAGAAAAACATTCCGGTTCTAAGCACATTCCTCTTCCTTCCTTTGCAGTGGAGGAGAGGGATTGGTTAGAGGCTTTTCTTTCTTCCCCCCTACCTTGCTCCCGGAGAGATGCTGGAAATGCTGCTAATGATGTAGTATGCTCCCCTCTTCCTATCCAACTTATTCCTTGTTTATTGCAGCCATTGTGCACTCTTCTTGTATCTCTTTACCTTGATGAACGTCTATGGTTACCACTTCCCATATCTAAAGCTGTAACAGTGATAAAGGATGTCATGATTTCTGCTCTAGACAAAAAGCAAAAGCCTTCTGAGCGCTGGTGGTTGCACATGGATGATTTTCTGCAAGAAACATATATTGTTTATGAGTTAAAGAAAAAACTTAATTGTTCTGGCATTATATCTGCTGACAACAGCAATGCTGGTTCTTATGATATTGTGGATGATGCCAATAGTAACATCTTGAAGTTAGAATCCTCCGCAAGGAACCATCTTGGCATGCGTAGTGGTTTATTCACATTGACCAACAAATCAGGATTTCGGATATTAATATCTGGAAATTCACGATCTGGACAGAGACATCTTGCTTCTTGCTTTCTTCACTGCTTTATTGGGAATATTGAAATACAGAAGATTGATATGGCAACTATTTTACAAGAAGGGCATGGAGAATTGGTGCAAGGGATTGGTCAGATACTAATGAAATGTGCTAGCAGGCAATCTTGCATAGTATTCTTGCCAAGAATTGATTTATGGGCTGTGGAGAAACATTTCCAAATTGCTGAAAGCACTGATTCTTGTTTAACTATGGGCAAGTCTTGTTTCACACCAAACCAAGATGTTGAGAAGGAAAATGAGATTAGTACTGAGATAGACTCAACTGAGATGACCAAAGGCCAAGCCAACACAAAGGCTTCATATGCCTGGATGTCATTTATTGAGCAGGTGGAATCCATTGGTGTATCCACATCCTTGATGATCTTGGCTACTTCAGAAGTTCCCTATAAAGAACTTCCTCGCAAAGTAAGAGAGTTCTTCAAGAGTTATTATCAATCTAAAGATGGCTGGTCAACTCCTTTGGAGCAGACAGTTCCTCGATTCTCTGTGCAGATTGATCAGAATTTTGATCATGACATGGTGATCCATCTATCTGCACTAGAGCTATTGAGAAATGTAGTTGAGCAGCTGGTTCAATTGATTCATCAGAGATCTCATGTTCATATGGGTGCTCAAAAGGGCAGAAGTTATGAATCAATTGAAGTTTCTAAAGATAAGGTATGTCAAAGAAAAGAAGATGGACCAGCCAATGATAAGAAGAGTGAAATCCAACTTGAATCCTTTACAAAAGTTCCACCAACACCCACCAGCAAGTCAATGAAGGGAAAGTCAACCCTGTTGTTAGCAATATCCACATTTGGCTATCAAATTCTTTTATACCCCCATTTTGCTGAACTTTGTTGGGTCACTTCAAAACTTGATGAAGGTCCTTGTGCTGATGTAAGTGGACCTTGGAGGGGTTGGCCTTTCAATTCCTGTATAATTCGTCCTAATAATTCACACAATATGGCAGTTTGTTGTAGTTCTGGTGGCACTAAAAGCAGAGAAGCATCTGGACTAGTCAGAGGCTTGATTGCTGTCGGTTTATCAGCTTACAGAGGTGTTTATAAATCAGTTAGGGAAGTTTCCCTCGATGTAAGGAAGGTTCTCGAGATCTTAATTGAGAAAATCAATACCAAAATTCAAGCTGGAAAAGATAGATATCAATATTTTCGTATTTTGTCGCAAGTGGCTTATTTAGAAGACATGGTCAACAACTGGGCTTACTCGTTGCTAAGTCTGGAGCAGGATTCCCCTGAGCATATAGCAAAGGTTATACCAGCAAGTGATGGGCCATTAAACAATCATCTCACACATGAAAATCACCAAACTGAAGGTGATGACTGTCATTTGGTTGTTCCTGTAGATGGTAATGATTTGGAGACATTGGAGGGAAGTCACAAGGAAATTCCTGCTGAAACAACTGGATGTCTTGCCTCTGGTGACAAAAATGATATTGTAGATATTATTGATTGTGATGATGGAAATGCTAGTTCTGAAGAATCTCTACAGAACCATTCTCTTTCAAATAATAATATCAACAACTCTGCTGCTGCTGCTGCTGGAAGCCAACCACTTTATCCATCCACAAGTCAGGAGAATGGTACATTATTTGGACAAACTGAATCTGTAACTGCTGGAAATAATGAAATGGTGGGTGAAAAACTAGGGATTTCGAAAGACTTGAACAAATCCATGTGCACTCACTCTGTGGTCCTTTCTGAAAATGGAGTTTACACTGCTTGCGAACCGGAGGCACAGAATGTTGAGATTGGTAACTGTCCTGTCTCTGATCAGCCAAACTTGTCCCCAGTAGAGGGTTCACAGAACGTTGAGATTGAGATTGGTAAGTGTCCTGTCTCTGATCAGCCAAGCTTGTCCCCAGTAAAGGGTTCACAGAATGTTAAGATTGAGATTGGTAACTTTCCTGTCTCTGATCAGCCAAGCTTGTCCCCAGTAGAGGGTTCACAGAATGTTGAGATTGAGATTAGTAACTTTCCTGTCTCTGATCAGCCAAGCTTGTCCCCAGTAGAGATCGGTGCTAAATCAAGTGATGTTAAATCTGATGAACATGAGAATGCTACAGATAATAATGTCTCTTCAAGTAATGGCAGTGGCCCTGCTGAATCTGGGGTTATTTGCTTGTATCAATGTTGCTCTGCATGTCTCCACAGTCTCCATCATTTGACAAAGAAAATACTTGTTGAAAAATGGGGTTTAAACAGTAACCAGTGGACAGCAGAAGATGTCCATGATGCTGTTGCATTATTATCTGTGGATCTTATTTCAGCAGTTAAAGCATGCTTTATGCCTCAAGATTTCACCTACTCACCAAATAAAACCTCAAGAAATGAAAAGAATGTAACATCTCTTGATTGTTTGAACCTCATGAAAATGTGTAATGCTGGAAACCAAGAAAAGGATGTTGTGCCAGCTGAATGTGTCTCTCACTCAGCTGCAATGGAAGAAGATATGGTACTGAGTGAAGAATCACCGAAGCTTGATCTTAAATTTGTTTTCAGAGATGGTGTACTAGTTCATATGGACCCAGACAAGGATGTCTCAGTTCACTGTAAATTTGAGAACTTGTGCCTTTGTTCTCTAAGAGAGTTGATACTAATGAAAAAGTGCCCTTTTGATTAG 5868 0.4317 MRSSPSSLGSSSRSGSRLRKKHKRLDAICEDEYTRNHVEVNEDIDDWNPDAGVRRSSRVRRAPQLLDASPAPPKKRRKVGQGGIGRGVEGARSLGRENKRSGGAWSSRLRSRVGNAGVRMKQESDSPRGKRKLFVAAVGTRGDDEVGGKEELGGLMPKVVKSKRPGRIKATKHEEGHEEDVSHGSLEESKSQEVDSVLSSDEESDSDPETELSGEDQMDDSDGDASPVIGSEEGDQMDDSDGNSSPVIESEEGDQLDDSDGDNLPMRGNEEGDQMDDLDENDPPVVGNEEKNLSNDLQIDECGGNVELSPVEHVDKVDDQLESVKESKSVGDVAELVDNEGSIGKEVDVDSNVSKDANDSKEVDVDEDVLKDSNVGRTDELKRASIDKRAHQRIKEGRRCGLCGVGSDGKPPKRLAQDNGESENEAYSGSSSSEETNYDIWDGFDDEPGWLGRLLGPINDHYGIARIWVHLHCAVWSPEVYFANFGCLKNVRAALVRGRALKCTRCGRRGATTGCRVDRCPRTYHLPCARASGCIFDHRKFLIACTDHRHLFQPRGNKYLARIKKLKARKMMWEIRKRSNEACRKDIGDEERWLENCGEDEEFLKRENKRLHRDLLRIAPVYIGGSESASENSFQGWESVAGLKDVIRCMKEVVILPLLYPELFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGACSRGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPTRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSIEDRASILSLHTQKWPKPITGSLLQWIARKTPGFAGADLQALCTQAAMNALKRNFPLHEVLSLAAEEKHSGSKHIPLPSFAVEERDWLEAFLSSPLPCSRRDAGNAANDVVCSPLPIQLIPCLLQPLCTLLVSLYLDERLWLPLPISKAVTVIKDVMISALDKKQKPSERWWLHMDDFLQETYIVYELKKKLNCSGIISADNSNAGSYDIVDDANSNILKLESSARNHLGMRSGLFTLTNKSGFRILISGNSRSGQRHLASCFLHCFIGNIEIQKIDMATILQEGHGELVQGIGQILMKCASRQSCIVFLPRIDLWAVEKHFQIAESTDSCLTMGKSCFTPNQDVEKENEISTEIDSTEMTKGQANTKASYAWMSFIEQVESIGVSTSLMILATSEVPYKELPRKVREFFKSYYQSKDGWSTPLEQTVPRFSVQIDQNFDHDMVIHLSALELLRNVVEQLVQLIHQRSHVHMGAQKGRSYESIEVSKDKVCQRKEDGPANDKKSEIQLESFTKVPPTPTSKSMKGKSTLLLAISTFGYQILLYPHFAELCWVTSKLDEGPCADVSGPWRGWPFNSCIIRPNNSHNMAVCCSSGGTKSREASGLVRGLIAVGLSAYRGVYKSVREVSLDVRKVLEILIEKINTKIQAGKDRYQYFRILSQVAYLEDMVNNWAYSLLSLEQDSPEHIAKVIPASDGPLNNHLTHENHQTEGDDCHLVVPVDGNDLETLEGSHKEIPAETTGCLASGDKNDIVDIIDCDDGNASSEESLQNHSLSNNNINNSAAAAAGSQPLYPSTSQENGTLFGQTESVTAGNNEMVGEKLGISKDLNKSMCTHSVVLSENGVYTACEPEAQNVEIGNCPVSDQPNLSPVEGSQNVEIEIGKCPVSDQPSLSPVKGSQNVKIEIGNFPVSDQPSLSPVEGSQNVEIEISNFPVSDQPSLSPVEIGAKSSDVKSDEHENATDNNVSSSNGSGPAESGVICLYQCCSACLHSLHHLTKKILVEKWGLNSNQWTAEDVHDAVALLSVDLISAVKACFMPQDFTYSPNKTSRNEKNVTSLDCLNLMKMCNAGNQEKDVVPAECVSHSAAMEEDMVLSEESPKLDLKFVFRDGVLVHMDPDKDVSVHCKFENLCLCSLRELILMKKCPFD 1955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0568 1955 MobiDBLite consensus disorder prediction 1740 1780 - -
Aed1g0568 1955 MobiDBLite consensus disorder prediction 43 61 - -
Aed1g0568 1955 MobiDBLite consensus disorder prediction 1 25 - -
Aed1g0568 1955 MobiDBLite consensus disorder prediction 198 222 - -
Aed1g0568 1955 MobiDBLite consensus disorder prediction 405 435 - -
Aed1g0568 1955 Pfam PHD-like zinc-binding domain 470 549 - -
Aed1g0568 1955 Pfam AAA+ lid domain 836 868 IPR041569 -
Aed1g0568 1955 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 637 868 IPR027417 -
Aed1g0568 1955 CDD AAA 669 810 - -
Aed1g0568 1955 MobiDBLite consensus disorder prediction 339 363 - -
Aed1g0568 1955 MobiDBLite consensus disorder prediction 168 197 - -
Aed1g0568 1955 Gene3D - 811 875 - -
Aed1g0568 1955 MobiDBLite consensus disorder prediction 43 301 - -
Aed1g0568 1955 ProSiteProfiles Extended PHD (ePHD) domain profile. 437 549 IPR034732 -
Aed1g0568 1955 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 445 551 IPR013083 -
Aed1g0568 1955 MobiDBLite consensus disorder prediction 421 435 - -
Aed1g0568 1955 ProSitePatterns AAA-protein family signature. 780 798 IPR003960 GO:0005524|GO:0016887
Aed1g0568 1955 SMART AAA_5 671 812 IPR003593 -
Aed1g0568 1955 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 50 1951 - -
Aed1g0568 1955 Gene3D - 636 810 IPR027417 -
Aed1g0568 1955 Pfam ATPase family associated with various cellular activities (AAA) 675 810 IPR003959 GO:0005524|GO:0016887
Aed1g0568 1955 PANTHER AAA DOMAIN-CONTAINING 50 1951 IPR045199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0568 Aed-Chr1 7191705 7200768 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0568 637 872 Calmodulin-binding Proteins AT3G56690 40.336 3.23e-44 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0568 - - gmx:100803849 2791.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0568 1 7191705 7200768 Aed1g0568 1 7191705 7200768 ECH