Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0563 ATGAAGAAACCGAAGCAAACTCAGCTGAGCCCCAATTGGGTTCAACTCCAACAAAAGCTGAAGCTGAATGGCCCTAAGGCTTCAAGGACCTTCAGAAACTCAGATAACGACACCCCAGAATCAATATTGGGGAAACGTAAAGAGAGACCAGATGATGAACCCAATGATTGTCAGATTAACCCTCTTGATCCTGTAAATGACGATTCAAGTCTGACAGATGCAGTGGCCATGGATTGTGAAATGGTAGGCGTAGGCCAAGGAAACAAAAGTGCCCTTGGAAGAGTAACTCTGGTCAATAAGTGGGGAAACGTTATTTATGATGAGTTTGTCCGGCCAATTGAGCGAGTTGTTGACTTCCGCACTAACATTAGTGGCATAAGACCTCGAGATCTTAGAAAAGCAAAGGATTTTTGGACTGCTCAGAAGAAAGTAGCAGAGTTCATCACTGGAAGGCTCCTTGTTGGTCATGCCTTGTCCAATGACCTTAAGTTTGTTCTAATTCTAATAAACTTGCCTTTGGGTTTAAACAGGTCAAGTAGCAGAAGAGCGCTGCGGCATCTTGCTGAGGAACATCTTGGTGTTGAGATCCAAACAGGAGAGCACTGTCCAGTAGAAGATGCTCGTGCTGCCATGCTGCTTTACCAAAGAAACAGAAAAGAATGGGAGAAGAGCATAAAAGATCAATCTCGATTCAAACAGAAGCAAAGGAAATCAAAGCAGAAAAAGAAGCAGAAGAATGAAGATGCTTCGGATGCCAACAATGTTGAAATTTGGTCATAG 780 0.4333 MKKPKQTQLSPNWVQLQQKLKLNGPKASRTFRNSDNDTPESILGKRKERPDDEPNDCQINPLDPVNDDSSLTDAVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTNISGIRPRDLRKAKDFWTAQKKVAEFITGRLLVGHALSNDLKFVLILINLPLGLNRSSSRRALRHLAEEHLGVEIQTGEHCPVEDARAAMLLYQRNRKEWEKSIKDQSRFKQKQRKSKQKKKQKNEDASDANNVEIWS 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0563 259 MobiDBLite consensus disorder prediction 24 66 - -
Aed1g0563 259 Pfam Exonuclease 75 165 IPR013520 -
Aed1g0563 259 SUPERFAMILY Ribonuclease H-like 74 220 IPR012337 -
Aed1g0563 259 SMART exoiiiendus 73 223 IPR013520 -
Aed1g0563 259 MobiDBLite consensus disorder prediction 24 38 - -
Aed1g0563 259 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 56 248 - -
Aed1g0563 259 MobiDBLite consensus disorder prediction 223 259 - -
Aed1g0563 259 Gene3D - 70 243 IPR036397 GO:0003676
Aed1g0563 259 MobiDBLite consensus disorder prediction 39 56 - -
Aed1g0563 259 CDD REX4_like 75 215 IPR037431 GO:0006364|GO:0008408
Aed1g0563 259 PANTHER INTERFERON STIMULATED EXONUCLEASE GENE 20-RELATED 56 248 IPR034920 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0563 52 218 C2H2 Transcription Factor Family AT2G48100 31.472 6.63e-21 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0563 K18327 - gmx:100811497 409.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0563 1 7145031 7147781 Aed1g0563 1 7145031 7147781 ECH