Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0525 ATGAACAACAACAACAACAATTCTTCTTCTCATTCTCCTTTCGCGGAGTTCTACGAGTCATGGTTCGAGGAGCTTGAGTCGCAGCTGAAGAGTGGTGATGAGCAGAAGGAGGAGGTGATGGAGAAGCTGATGTGGCACCACCAGAACTACTACAGAGAGAAGTCTCTGGCGGTTGAGAAGGACGCTCTCAACGTCTTCCTCTCTCCCTGGGCCACCACTCTGGAGCGCTCCCTCCACTGGATCACCGGCTGGCGCCCCACCACCGCCTTCCACCTCATCTACACCGAGTCCTCCCTCCTCTTTGAGTCCCACATCATCGACATCCTCCAGGGCCTCCGCACCGGAGACCTCGGTGACCTCTCCCCCTCCCAGTTCCGCCGCATCAGCGACCTCCAATGCGACACCGTACAGGAGCTGTCGGAATGGCAGGACAGTGTGAGCGAGATGATGGGCCCAGGCACGGACATCAACGATAAGATCAGGCGGCTGGTGTGCATTATAAAGAAAGCAGATGATCTACGGCTCAGAACGTTGCGGAGCGTGGTGGGGCTGCTGTCACCGCAGCAGGGTATCGAGTTCTTGATTGCCTCAGCGGAGTTGCTCGTTGGGATACGTGGTTGGGGATTGAATCATGACCGTCCACGTCGCAGATGA 654 0.5688 MNNNNNNSSSHSPFAEFYESWFEELESQLKSGDEQKEEVMEKLMWHHQNYYREKSLAVEKDALNVFLSPWATTLERSLHWITGWRPTTAFHLIYTESSLLFESHIIDILQGLRTGDLGDLSPSQFRRISDLQCDTVQELSEWQDSVSEMMGPGTDINDKIRRLVCIIKKADDLRLRTLRSVVGLLSPQQGIEFLIASAELLVGIRGWGLNHDRPRRR 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0525 217 Pfam Seed dormancy control 23 95 IPR025422 GO:0006351|GO:0043565
Aed1g0525 217 Coils Coil 22 42 - -
Aed1g0525 217 PANTHER DNA-BINDING PROTEIN-LIKE PROTEIN 9 216 - -
Aed1g0525 217 PANTHER - 9 216 - -
Aed1g0525 217 ProSiteProfiles DOG1 domain profile. 4 214 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0525 Aed-Chr1 6854406 6855432 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0525 12 214 Calmodulin-binding Proteins AT5G65210 22.685 5.85e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0525 - - gsj:114374825 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0525 1 6854406 6855432 Aed1g0525 1 6854406 6855432 ECH