Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0511 ATGGAGAATAATCAGCCATCAAATATTGGAAGAAAGGCAATGGAAGAAGAACTAATCAAAGGGCGTGACATAGCAAATCAGTTACTTGAAGTACTACTTGTTCATAAATCCAACACTAATCGTGAAGATGTACAACTAGTAGAAGGGTCAATGCAACCATTTGCTGAAGATCTTGTGCGCAAGGTGCTGTGTTCATTCACAAACACCCTTTTGCTTTTGAACACTAATAGTGATGTCTCCAATCATGTTATTATGCCTATGATCACTATCAAAGATGCCCCTTTGTCCGTAAAATTCCCAAAGCCTCAGGATCAGGATACTATGGTCGATGCTAAAAGAAGAAGAGGGTGCTACAACAGAAAGAGATCAAGTGCACCAACATGGGAGACAAACAGCTCAATTCTGATGGAAGATGGCTATGCATGGAGAAAGAGCTACTACAGATGCACTAACAAATATGAAGAGGGTTGTCCAGCAATCAAACACGTTCAGAGAATTCAAGAGGAGCCTCCATTGTACCGGACAACATATTATGGCCATCACAATTGCAAAAGCTCTTTAAGTCCTGAGATAATGATGGAACCAGCTTCTTCTATTAATTCTGGCTCTTCTATGTTCCTTAGCTTCAGTAACAATACCTTCACAAGCAAAGAAAAATACTCATTTTCTTCATCCACCAGACAGGAGCCTATGGAAGTGATTATGGAGGATCATCATCACCATAGTGTTCACAATCAATTGCCCTCATCAGATTACCATATGTTGTATGACAATGAACTTGATTTCAATTATTCGAGATATGTTACTATGCTATCCACCACTGAATCTGCTCAATTCGATAAGGTTTATGGGAATGGTATGTATTTTGATGGTTAG 876 0.3916 MENNQPSNIGRKAMEEELIKGRDIANQLLEVLLVHKSNTNREDVQLVEGSMQPFAEDLVRKVLCSFTNTLLLLNTNSDVSNHVIMPMITIKDAPLSVKFPKPQDQDTMVDAKRRRGCYNRKRSSAPTWETNSSILMEDGYAWRKSYYRCTNKYEEGCPAIKHVQRIQEEPPLYRTTYYGHHNCKSSLSPEIMMEPASSINSGSSMFLSFSNNTFTSKEKYSFSSSTRQEPMEVIMEDHHHHSVHNQLPSSDYHMLYDNELDFNYSRYVTMLSTTESAQFDKVYGNGMYFDG 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0511 291 SUPERFAMILY WRKY DNA-binding domain 132 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed1g0511 291 Gene3D WRKY domain 122 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed1g0511 291 ProSiteProfiles WRKY domain profile. 131 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed1g0511 291 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 281 - -
Aed1g0511 291 Pfam WRKY DNA -binding domain 143 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed1g0511 291 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 281 IPR044810 GO:0003700
Aed1g0511 291 SMART WRKY_cls 136 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0511 Aed-Chr1 6753430 6755046 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0511 17 183 WRKY Transcription Factor Family AT3G56400 31.720 1.69e-22 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed1g0511 WRKY 5e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0511 - - gmx:102663141 337.421