Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0509 ATGGAGAATCAGCAAAGGGCAATGGAAGAAGAACTAATCAGAGGGCGTGACAGGGCAAATCAGATACTTGAAGTACTTGTTCATGATCATAAATTTAACAACACTCACCTTGAAAAGTTGCATGAAGGGTCAAAGTCGTCATCAGTGTTACCATTTGTTGAAGATCTTGTGCGCAAGGTCTTGTGTTCATTCACGAATACCCTTTTGCTTTTGAACTCTAATAATGATATCTCCAATGAGGTGGTGGCATCTGTTAATCCCAGAGATATCTCTTCGTCCACGAGTTCCGCAAAGCTGGAGTCTATGGATGAAACCTGCAAGAGTCGAAACAGTGCCAAAACTAGAAGAAGAGGCTACAAGAGGAAATCAATCGCGCCAACTTGGGAGAAGGACAGCTCAATACTAATTGAAGATGGCTGTTATGGACAAAAATTGACATTAAACGCCAAATACCTCAGGAGCTACTACAGGTGCACTCACAAGAGTGATCAGGGATGCCAAGCAATGAAACAAGTTCAGAGAATTCAAGATAATCCTCCTTTGTACCGAACAACCTACTATGGCCATCACACTTGTAGAAGCACTTTCATGAATTCAGAGATTATTTTGGAACCTCTTTCTCCCTCTGCTTCTAATTCCACCTTACTTAGCTTTAACAACATCTTTCAAAGCAAACAAGAAAACCCTTTTCCCTCATCACTACTTGCACCAACCAAACATGAGCCAGTGGAAGTGATTCATGATTATCATCATAGTGCTCAAAATCATCAATTGTCCTCACCTGAAGAAGACCTTCTATTATACGATTATGGAATTTATTTTGATTATTCGAAGCGTTTAGCTATGCTATCATCCACTGAAACGGTTGAATTTGAGAATGTTTATGAGCAGTTTGGATTTTATTGA 906 0.3985 MENQQRAMEEELIRGRDRANQILEVLVHDHKFNNTHLEKLHEGSKSSSVLPFVEDLVRKVLCSFTNTLLLLNSNNDISNEVVASVNPRDISSSTSSAKLESMDETCKSRNSAKTRRRGYKRKSIAPTWEKDSSILIEDGCYGQKLTLNAKYLRSYYRCTHKSDQGCQAMKQVQRIQDNPPLYRTTYYGHHTCRSTFMNSEIILEPLSPSASNSTLLSFNNIFQSKQENPFPSSLLAPTKHEPVEVIHDYHHSAQNHQLSSPEEDLLLYDYGIYFDYSKRLAMLSSTETVEFENVYEQFGFY 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0509 301 Gene3D WRKY domain 128 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed1g0509 301 ProSiteProfiles WRKY domain profile. 141 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed1g0509 301 Pfam WRKY DNA -binding domain 141 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed1g0509 301 SUPERFAMILY WRKY DNA-binding domain 141 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed1g0509 301 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 3 293 IPR044810 GO:0003700
Aed1g0509 301 SMART WRKY_cls 136 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed1g0509 301 MobiDBLite consensus disorder prediction 88 118 - -
Aed1g0509 301 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 3 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0509 Aed-Chr1 6743163 6745454 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0509 21 278 WRKY Transcription Factor Family AT3G56400 33.564 1.45e-28 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed1g0509 WRKY 9e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0509 - - gmx:102663281 433.335