Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed1g0509 | ATGGAGAATCAGCAAAGGGCAATGGAAGAAGAACTAATCAGAGGGCGTGACAGGGCAAATCAGATACTTGAAGTACTTGTTCATGATCATAAATTTAACAACACTCACCTTGAAAAGTTGCATGAAGGGTCAAAGTCGTCATCAGTGTTACCATTTGTTGAAGATCTTGTGCGCAAGGTCTTGTGTTCATTCACGAATACCCTTTTGCTTTTGAACTCTAATAATGATATCTCCAATGAGGTGGTGGCATCTGTTAATCCCAGAGATATCTCTTCGTCCACGAGTTCCGCAAAGCTGGAGTCTATGGATGAAACCTGCAAGAGTCGAAACAGTGCCAAAACTAGAAGAAGAGGCTACAAGAGGAAATCAATCGCGCCAACTTGGGAGAAGGACAGCTCAATACTAATTGAAGATGGCTGTTATGGACAAAAATTGACATTAAACGCCAAATACCTCAGGAGCTACTACAGGTGCACTCACAAGAGTGATCAGGGATGCCAAGCAATGAAACAAGTTCAGAGAATTCAAGATAATCCTCCTTTGTACCGAACAACCTACTATGGCCATCACACTTGTAGAAGCACTTTCATGAATTCAGAGATTATTTTGGAACCTCTTTCTCCCTCTGCTTCTAATTCCACCTTACTTAGCTTTAACAACATCTTTCAAAGCAAACAAGAAAACCCTTTTCCCTCATCACTACTTGCACCAACCAAACATGAGCCAGTGGAAGTGATTCATGATTATCATCATAGTGCTCAAAATCATCAATTGTCCTCACCTGAAGAAGACCTTCTATTATACGATTATGGAATTTATTTTGATTATTCGAAGCGTTTAGCTATGCTATCATCCACTGAAACGGTTGAATTTGAGAATGTTTATGAGCAGTTTGGATTTTATTGA | 906 | 0.3985 | MENQQRAMEEELIRGRDRANQILEVLVHDHKFNNTHLEKLHEGSKSSSVLPFVEDLVRKVLCSFTNTLLLLNSNNDISNEVVASVNPRDISSSTSSAKLESMDETCKSRNSAKTRRRGYKRKSIAPTWEKDSSILIEDGCYGQKLTLNAKYLRSYYRCTHKSDQGCQAMKQVQRIQDNPPLYRTTYYGHHTCRSTFMNSEIILEPLSPSASNSTLLSFNNIFQSKQENPFPSSLLAPTKHEPVEVIHDYHHSAQNHQLSSPEEDLLLYDYGIYFDYSKRLAMLSSTETVEFENVYEQFGFY | 301 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed1g0509 | 301 | Gene3D | WRKY domain | 128 | 194 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Aed1g0509 | 301 | ProSiteProfiles | WRKY domain profile. | 141 | 195 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aed1g0509 | 301 | Pfam | WRKY DNA -binding domain | 141 | 193 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aed1g0509 | 301 | SUPERFAMILY | WRKY DNA-binding domain | 141 | 193 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Aed1g0509 | 301 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 3 | 293 | IPR044810 | GO:0003700 | |
Aed1g0509 | 301 | SMART | WRKY_cls | 136 | 194 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aed1g0509 | 301 | MobiDBLite | consensus disorder prediction | 88 | 118 | - | - | |
Aed1g0509 | 301 | PANTHER | TRANSCRIPTION FACTOR WRKY FAMILY-RELATED | 3 | 293 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed1g0509 | Aed-Chr1 | 6743163 | 6745454 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed1g0509 | 21 | 278 | WRKY Transcription Factor Family | AT3G56400 | 33.564 | 1.45e-28 | 109 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Aed1g0509 | WRKY | 9e-17 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed1g0509 | - | - | gmx:102663281 | 433.335 |