Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0508 ATGGAGAATAATCAGCCATCAAATGGAAGAAGAAAGTCAATGGAAGAAGAACTAATCAAAGGGCGTGACATAGCAAATCAGTTACTTGAAGTACTCCTTGTTCATAAATCCAACACTAATCAACATGATGGTGTAGAAGAGGAAGGGTTACTAGTGTTACCATTTGCTGAAGATCTTGTTCGCAAGGTACTCAAATCATTCACAAATACCCTTTTGCTATTGAGCACTCATAGTGATGTCTCCGATGAGGTTCTTATGCCTATCACTATCAAAGATGTCTTTTCGTCCTTGAAATGCCCAAAGCCTGAGGAGGATAAGGATGAGGCTTATTTCAACGCTAAAAGACGAAGAGGGTGCTACAAGAGAAAATCAAGTGCACCAACATGGGAGACGAACAGCTCAATTCTGATGGAAGATGGCTATGCATGGAGAAAGAACTACTACAGATGCACTCACAAGTATGATGAGGGTTGTCCAGCAACCAAACAGGTCCAAAGAATTCAAGAAGACTCTCCATTGTACCGGACAACATATTATGGCCATCACAATTGCAAAAGCTCTAATTTAAGTCCTGAGATATTGTTGGAACCAGCTTCTTCTTCTGACTCTTCTATGTTCCTTAGCTTCAGTAACACTAACACCTTCCCAAGCAAAGAAGAATACCCATTTTCATCACCACTTTTTTCATCCATGAAACAGGAGCCTATGGAAATGATTCAGGATGATCATATAATTGCTCACAACCGATTACCCTCACCAGATTACCACCAGTTATGTGACTATGATGAACTTGATTTCAAATAG 804 0.4005 MENNQPSNGRRKSMEEELIKGRDIANQLLEVLLVHKSNTNQHDGVEEEGLLVLPFAEDLVRKVLKSFTNTLLLLSTHSDVSDEVLMPITIKDVFSSLKCPKPEEDKDEAYFNAKRRRGCYKRKSSAPTWETNSSILMEDGYAWRKNYYRCTHKYDEGCPATKQVQRIQEDSPLYRTTYYGHHNCKSSNLSPEILLEPASSSDSSMFLSFSNTNTFPSKEEYPFSSPLFSSMKQEPMEMIQDDHIIAHNRLPSPDYHQLCDYDELDFK 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0508 267 Pfam WRKY DNA -binding domain 144 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed1g0508 267 ProSiteProfiles WRKY domain profile. 132 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed1g0508 267 Gene3D WRKY domain 122 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed1g0508 267 SUPERFAMILY WRKY DNA-binding domain 133 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed1g0508 267 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 262 IPR044810 GO:0003700
Aed1g0508 267 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 262 - -
Aed1g0508 267 SMART WRKY_cls 137 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0508 Aed-Chr1 6734255 6735790 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0508 17 192 WRKY Transcription Factor Family AT3G56400 32.292 9.54e-24 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed1g0508 WRKY 1.4e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0508 - - gmx:102663141 375.555