Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0507 ATGGAAAATCATCAGCTTCCAAATGCCAGAAAGGCAATGGCAGAAGAGCTAATCAGAGGGCGTGGCATGGCAAATCAGTTATTGGAACTACTTGTTCATCGTGGTGATCATAAACGGAACAACATTCATCATTTTGAAATGGAAGAAGGTTCAAATTCAGTGTTAGTGTTACCATTTGTCGAAGATCTTGTCCACAAGATCAACTGTGCTTTCACAAATACCCTTTTGCTTTTGAACTCCAATAGTGATCATGTCTCCGATGAAATCTGGGAGAATAGTCACAATATTCTCATCAACACCAAAAAACGAAGAGGCTGCAGCAGAAAATTAACAGCACCAACGTTGGAGAAGGGAAGCTCAATACCGATTGAAGATGATGGCTATGCATGGAGAAAGTACGGACAAAAAATGACATCCAACTCTAAATACATGAGGAGCTACTACAAGTGCAGTCACAAGAGTGATCAGGGATGCGAAGCAATAAAACAGGTGCAAAGAATTGAAGATGAGCCTCCTTTGTACCGAACAAGCTACTATGGCCATCACATTTGTAATAAAAGCACTTTGAAGAACCATCCCGAGATTATTTTGGAACCTCTTTCTCCCTCTGCCTCTAATTCCACATTACTTAGCTTCAATAACACCTTTCAAAGAGAACAAGAAAACCCGTTTCCCTCATCACTACTACTTGATGAATATTCAACCAAACATGAGCACCAGGAAGTGATTATTCACGGTCATGACCATAGTGTTCAAAATCAGTTGTCTGCGTTAGAAAACCTCTTACTATTCAATTATCATGACACTTCTTTTGATTATTCGAGGAATAATGACACTTTGCTATCCTCGACTGAATGCGTTCAATTTGAGAATGTTTATGAGCAATTTGGATATTGA 897 0.3924 MENHQLPNARKAMAEELIRGRGMANQLLELLVHRGDHKRNNIHHFEMEEGSNSVLVLPFVEDLVHKINCAFTNTLLLLNSNSDHVSDEIWENSHNILINTKKRRGCSRKLTAPTLEKGSSIPIEDDGYAWRKYGQKMTSNSKYMRSYYKCSHKSDQGCEAIKQVQRIEDEPPLYRTSYYGHHICNKSTLKNHPEIILEPLSPSASNSTLLSFNNTFQREQENPFPSSLLLDEYSTKHEHQEVIIHGHDHSVQNQLSALENLLLFNYHDTSFDYSRNNDTLLSSTECVQFENVYEQFGY 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0507 298 SMART WRKY_cls 124 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed1g0507 298 SUPERFAMILY WRKY DNA-binding domain 121 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed1g0507 298 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 291 IPR044810 GO:0003700
Aed1g0507 298 ProSiteProfiles WRKY domain profile. 119 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed1g0507 298 Pfam WRKY DNA -binding domain 125 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed1g0507 298 Gene3D WRKY domain 111 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed1g0507 298 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0507 Aed-Chr1 6730151 6731705 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0507 10 184 WRKY Transcription Factor Family AT5G01900 38.587 9.07e-29 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed1g0507 WRKY 4.8e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0507 - - gmx:102663281 313.153