Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0494 ATGATCACGAGGATAAGTTTCTTCTTCCTTTTTCTTTTGCTCCTTATTGCTCTCTTGGCTTCTGGCCAAGGTACTCTGCCCGAAGATGAAGTGGAGGCTCTGAAAGAAATAGGTAAGATACTTGGGAAGAACTGGGATTTCAGCGGAGATCCGTGCAGTGGAGAACAAAATTGGACATCAGACAATAATGCGACATGCAATAATTGCACCAATGGGGTCTGCCATGTGACCATGATAAGTTTGAAAGAACAAAATCTTCAAGGTACTCTCCCGCAGGATCTGTCTAGATTGCCATACCTTCAAGTAATTGACTTTACTCGCAACTACCTGAACGGTACAATTCCTAAAACATGGGGCTCAACACAACTTCGTAATATTGACCTCCTTGGAAATCGATTAACGGGCTCAATACCAGTAGAGATAGGAAACATATCCACTCTTCAAAGTTTGGTCTTGGAAGGCAATCAAATGTCTGGAAATCTTCCTGATGAGCTTGGGAATCTAACCCAAATTCAAAGACTGCTACTTTCCTCCAACAATTTTACTGGACAACTACCAGTAACATTGGCCAAGCTCACTACATTGAAAGATATAAGAATTAGTGATCTTAAAGGATCTGAACTTTCACCTTTTCCAGAAGTTCAAAAAATGAAGTTGCAAAAATTGATTCTGAGGAATTGCAGCATCAATGGAACACTACCTGATTATCTTGGGTCAATGACAAGTTTAGATGACAATTTAGACCTCAGCTTTAACAAGTTGACTGGACCAATTCCGAATACCTATGATAGTAATGCCCTAAGCAAAGTGACATACATATATTTAACTGGAAATCAACTTAATGGATCAGTGCCTACATGGATGATAGAAAGAGCTAAGAAAGTAGATCTTTCATATAACAACTTCAGCATCACAAGCCAACAAAAATGTCAAGAAGGAAATACGAACTTGTTTGCTAGCTCTATAACACCCAATGACTCAGGAACAGTTGCATGTTTGGGAAGCAATGTCTGTTCAAAAGCCTTATACTCTTTTCATATAAATTGTGGTGGAGGGACGGTAACATTAAGCAATGGAACCACATTTGATGATGATGATTTAGATGCTGGAGTTGAAGCTAGATTTCAGAGGATTGGAACAAGAAATTGGGCATTTAGCAGTACTGGTAACTTTATGAATGCTGTAGGTGGAGGCAAATATACGCCAAAAAATACATCTTTGCTTTCTATGGACAATGCTGAACTGTACATGAACGCACGAGGCTCTCCCATTTCCTTGACTTACTATGGATTTTGCCTGCAAAAAGGAAACTACACAGTGTATCTACATTTTGCGGAAATCGTGTTCACTGATGATCAAACATATAGCAGCCTAGGAAGGCGAGGAAAGCTGGAGCAAGCGGAATTTAATATTGCAGAAGAAGCAGGAGGAATTGGTAAGGTGGTCATAAAAAAATTCACTGCTGTTGTGACTAACAATGCCTTGGAGATCCGCTTGTATTGGGCTGGAAAAGGGACAACTAGTCTACCAAATAGATCAGTATATGGTCCTCTTATATCAGCTATATCTGTGGAATCTGACTCTCCACCTCCTCCCTCGGAAAATGAAAGTAGCATATCTGCAGGAGCTGTGGCTGGAATTGTGGCTGCAGGAATAGTTGGATGTCTATTAGATGGGACATTAGTAGCAGTCAAGCTACTTTCATCTAAATCAAAACAAGGGAACCGTGAGTTTTTAAACGAGATAGGAATGATTTCTGCTTTGCAACATCCTCATCTTGTTAAAATCTATGGATGTTGTGTGGAGGGAGATCAACTATTGTTGGCACATTTGTTGAAAGAGAAAGGTGATCTAATGGAGCTAGTTGACAAAAGATTGGGTTCGGACTTCAATAAAGAAGAGGCATTGGTGATGATAAAGGTGGCTCTCTTGTGCACTAATGTGACAGCAGCACATAGGCCAATCATGTCATCAGTGGTAAGCATGCTAGAAGGAAGAACTGTTGTTGAGGAATTGGTTTCCGAAACAAGTGAATTAATGGGTGAGAAGAAGTTGGAGACAATGAGAAAATATTACCATGACTTGAGCATCTCAATAGAAGAGCCATGGACTGCTTCATCTACTTCTGCATCAGATCTTTATCCTACACACCTAGATTCTTCTTTTTTGGAGAAGAGAAATTAG 2184 0.3997 MITRISFFFLFLLLLIALLASGQGTLPEDEVEALKEIGKILGKNWDFSGDPCSGEQNWTSDNNATCNNCTNGVCHVTMISLKEQNLQGTLPQDLSRLPYLQVIDFTRNYLNGTIPKTWGSTQLRNIDLLGNRLTGSIPVEIGNISTLQSLVLEGNQMSGNLPDELGNLTQIQRLLLSSNNFTGQLPVTLAKLTTLKDIRISDLKGSELSPFPEVQKMKLQKLILRNCSINGTLPDYLGSMTSLDDNLDLSFNKLTGPIPNTYDSNALSKVTYIYLTGNQLNGSVPTWMIERAKKVDLSYNNFSITSQQKCQEGNTNLFASSITPNDSGTVACLGSNVCSKALYSFHINCGGGTVTLSNGTTFDDDDLDAGVEARFQRIGTRNWAFSSTGNFMNAVGGGKYTPKNTSLLSMDNAELYMNARGSPISLTYYGFCLQKGNYTVYLHFAEIVFTDDQTYSSLGRRGKLEQAEFNIAEEAGGIGKVVIKKFTAVVTNNALEIRLYWAGKGTTSLPNRSVYGPLISAISVESDSPPPPSENESSISAGAVAGIVAAGIVGCLLDGTLVAVKLLSSKSKQGNREFLNEIGMISALQHPHLVKIYGCCVEGDQLLLAHLLKEKGDLMELVDKRLGSDFNKEEALVMIKVALLCTNVTAAHRPIMSSVVSMLEGRTVVEELVSETSELMGEKKLETMRKYYHDLSISIEEPWTASSTSASDLYPTHLDSSFLEKRN 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0494 727 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 554 609 - -
Aed1g0494 727 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 615 682 - -
Aed1g0494 727 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 63 203 - -
Aed1g0494 727 Gene3D Phosphorylase Kinase; domain 1 545 610 - -
Aed1g0494 727 Gene3D - 342 527 - -
Aed1g0494 727 Pfam Protein tyrosine and serine/threonine kinase 555 638 IPR001245 GO:0004672|GO:0006468
Aed1g0494 727 Pfam Malectin domain 344 522 IPR021720 -
Aed1g0494 727 ProSiteProfiles Protein kinase domain profile. 533 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g0494 727 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 554 609 - -
Aed1g0494 727 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 615 682 - -
Aed1g0494 727 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 63 203 - -
Aed1g0494 727 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 195 493 - -
Aed1g0494 727 SUPERFAMILY Protein kinase-like (PK-like) 548 638 IPR011009 -
Aed1g0494 727 SUPERFAMILY L domain-like 46 322 - -
Aed1g0494 727 Gene3D Ribonuclease Inhibitor 33 194 IPR032675 -
Aed1g0494 727 Gene3D Ribonuclease Inhibitor 195 321 IPR032675 -
Aed1g0494 727 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 195 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0494 Aed-Chr1 6616445 6626194 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0494 609 712 Receptor kinase-like Gene Family AT1G53420 43.750 2.26e-18 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed1g0494 Malectin 5.3e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0494 - - gmx:732563 587.415