Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0490 ATGGCACCTCAATTGGCACTGACTCACTCTTCTCTTCTCTGTGTTCCTCCCCCTCATGCTTCTCTCCGTTTCAGAAGGAATAAAGATTTGATTCCACAAAGATGTACTACAATCAACAGGAAAAAGAATCATGCCATCACAGCTTTTGCAGGCAATTCTCTTGGAAAATCATCTATCCAACTCACTGTTGTTTCATCTCCACTATTTACTGATAAAGAAGCTCGCCTCTCACTCAGACCTCCTATATCTCAAAGATGCAATTCTAAGATCCGTGGACAGGCATTTACATATCATTCGTCTGGTTTCCGAATCCCATCAAATGCTGAGAAGCCAGAATGGTGGTGGAGGACTTTATCCTGTATTCCCTATCTAATAGCAATGCAGATGTCTGCAACTGGGTTTTTTCTAGAACCTTTGATTCAAAAATTTCCGATCTTTCAGAATTTGATTTTCTATATCCCAGGAGGTGTCAACCGGTTACCAATCTGGTTCCCTATGTTATACTGCTACGTGGCTATTGTATGGGTGGTTAAAAACAGGGACTTGCCCCTTATCTTCAGATTCCATGTAATGATGGGAATGCTACTGGAACTTGCTCTACAGATAGTGTACATTTCAAGCAATTTCATGCCACTCATACACTTCCAAGGGGGAACATTGGGGATGTATTACTGGGCTGGTGTGGCATTGGCATATATTTTTACAGTGATAATGTGCATAAGGTGTGCACTTCTGGGTACATTTGTGAGTATCCCTCTTGTTAGCGAATCAGCCTTCATTCATTCTCTATTCGGTTTAGGAGGATTGCAACGGCCATTTTAG 822 0.4173 MAPQLALTHSSLLCVPPPHASLRFRRNKDLIPQRCTTINRKKNHAITAFAGNSLGKSSIQLTVVSSPLFTDKEARLSLRPPISQRCNSKIRGQAFTYHSSGFRIPSNAEKPEWWWRTLSCIPYLIAMQMSATGFFLEPLIQKFPIFQNLIFYIPGGVNRLPIWFPMLYCYVAIVWVVKNRDLPLIFRFHVMMGMLLELALQIVYISSNFMPLIHFQGGTLGMYYWAGVALAYIFTVIMCIRCALLGTFVSIPLVSESAFIHSLFGLGGLQRPF 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0490 273 Pfam Chloroplast import apparatus Tic20-like 85 258 IPR005691 -
Aed1g0490 273 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 15 273 IPR005691 -
Aed1g0490 273 PANTHER PROTEIN TIC 20-IV, CHLOROPLASTIC 15 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0490 Aed-Chr1 6589813 6592509 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0490 103 272 Chloroplast and Mitochondria Gene Families AT4G03320 53.529 3.25e-71 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0490 - - gmx:100790611 479.944