Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0489 ATGAAGAAGATTATCACTTCCTCTTCCTCCCAGTTTCTCCTCCTTTCACTACTTGCCTTATGGTTCACATCGCTTGCTTTTGGAGCCAATATCACTCAGCCAGAAGAAGTGGAAGCTCTGAAAGATATGGGGAAGAGGCTTGGTAAGAAGGAATGGGACACCGAAATAGATCCATGCAGTGGACAATCACCATGGAATACCACTACTGTGAAGGACCTCCTAATGAACGAAGTAGTGAACAGTGTCACCTGCAATTGCTCAATCCCCGGTCATGACAACTTCTGCCATGTTGCTTCAATATTGCTGAAATCACAAAATCTTGAAGGCATGCTCCCACCCGAACTGATAAGGTTGCCTTACCTCGAAGAAATTGACCTATCTCGCAACTACCTTAACGGTACAATACCTCCTGAATGGGGCTCCTCCAATCTTCGCACTATGTATTCACTATTCTCTCTGTTTCTTCACTTTTCTTCTTTGCTCTACTTTTTGTCATTAAACAAATTTGTCTTTGATTTCCATGCTAGTTCTCTTCTTGGAAATCGATTAACTGGTCCAATCCCTAAAGAGATAGGAAACATTACTACCCTCGAAAATTTGGAACTGGAATTCAATCAATTCTCTGAAAGTCTCCCTCCAGAACTTGGGAACCTTTCTAGCATTCAAAGACTGAATCTTACATCTAACAACTTTACTGGAGAGTTGCCTGAAGCTTTGGCAAAACTTACAACATTGACAGTACTCCGAATTAGTGACAATCGATTCTCTGGAAAGATACCCGATTTTATTCAAAGATGGACAAATCTAAAATCACTAGCAATTCAAGGGAGTGGTTTAACTGGGCCAATTCCTTCTGGAATTTCATTCCTGCATAAATTAGAGGACTTGAGAATTAGTGACTTGAATGGAAATGATTCTGCTTTTCCACCAGTTAATCAAATGACAAAATTGAAAATATTGATACTAAGAAGTTGCAATATTAATGACACATTACCTCTATCTCTTGGGAACAAGACAAACTTTGATGACATGCAAACCTTAGACCTGAGCTATAACAAATTAAGCGGAACCATTTCAGAAGTCTTTCAAAACCGATCAGGATTGACTTACTTATTTTTGACTCGAAACTCACTCACTGGAGCAATACCCGCATGGGTATTAGACAATAGTCAAACTCTCATTAACTCCCTCTATATAAACTGTGGTGGAGGTTACATAAACAGTAGTGGTGGTATAGCATATGATAAGGATGAAGATCCAGGAGACCCATCATCATATATAGAGGGGGTAGAAAATTGGAGATTTAGCAACACCGGTTTCTTTTTGGATAATGCCAATGTCACTGGAGAGCTGGTATTAAAGGATTATAATATTGCAAATGCAGCTGGAGGAGTTGGAAAGGAAAGAATAGAACAATTTGTTGCTCATGTTAGTAATAACTCTTTAGAAATTGGATTTTATTGGGCTGGAAAAGGGACAACTTCTATTCCATATAGTTCAGTATATGGCCCTCTTATATCAGCTATATCTGTCATTCGTGCCGACTCAACAGCTGATGACAGCATGTCTACAGGGGCTATAGTTGGGATAGTAGTTTCTGCAATTGTTCTTGTCATCCTAATCGGCATTTTATCAAATGGCACAATAATAGCTGTGAAGATGCTTTCATCTAAGTCAAAGCAAGGAAACCGTGAGTTTATAAATGAGATAGGCATGATTTCGGCATTGCAACATCCATGTCTTGTTAAACTTTATGGTTGTTGTGTTGAGGGATCTCAGTTGTTGTTGGCACATTTATTGAAAGAGAAAGGTAACCTAATGGAGCTAGTTGATAGAAGGCTAGGTTCAGATTTGAATAAAGATGAAGCGATGATGATGATCAACGTGGGTCTCCTATGCACCAACCCCACTTCAAACCTTAGGCCAACAATGTCATCGGTGCTTAGCATGCTTGAAGGAAGAGCTACGGTTCCAGAATTTATTTCAGACCAAAGTGAGAAAATGGATGAAATGAAATTAGAGGAAATGAGACAACATTACTTGCAAGTAGAAGAAAATGAGACACAAATCACACAAAGTCATGCTTTTTCAATTGAAGGGCCATGGACTGCTTCATCTTCATCAGCCGCAGACCTATACCCTGTTCACGTTGATTCTTCTTATTGGGAGAAAAGAAATTAG 2181 0.3934 MKKIITSSSSQFLLLSLLALWFTSLAFGANITQPEEVEALKDMGKRLGKKEWDTEIDPCSGQSPWNTTTVKDLLMNEVVNSVTCNCSIPGHDNFCHVASILLKSQNLEGMLPPELIRLPYLEEIDLSRNYLNGTIPPEWGSSNLRTMYSLFSLFLHFSSLLYFLSLNKFVFDFHASSLLGNRLTGPIPKEIGNITTLENLELEFNQFSESLPPELGNLSSIQRLNLTSNNFTGELPEALAKLTTLTVLRISDNRFSGKIPDFIQRWTNLKSLAIQGSGLTGPIPSGISFLHKLEDLRISDLNGNDSAFPPVNQMTKLKILILRSCNINDTLPLSLGNKTNFDDMQTLDLSYNKLSGTISEVFQNRSGLTYLFLTRNSLTGAIPAWVLDNSQTLINSLYINCGGGYINSSGGIAYDKDEDPGDPSSYIEGVENWRFSNTGFFLDNANVTGELVLKDYNIANAAGGVGKERIEQFVAHVSNNSLEIGFYWAGKGTTSIPYSSVYGPLISAISVIRADSTADDSMSTGAIVGIVVSAIVLVILIGILSNGTIIAVKMLSSKSKQGNREFINEIGMISALQHPCLVKLYGCCVEGSQLLLAHLLKEKGNLMELVDRRLGSDLNKDEAMMMINVGLLCTNPTSNLRPTMSSVLSMLEGRATVPEFISDQSEKMDEMKLEEMRQHYLQVEENETQITQSHAFSIEGPWTASSSSAADLYPVHVDSSYWEKRN 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0489 726 Gene3D Phosphorylase Kinase; domain 1 517 598 - -
Aed1g0489 726 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 603 696 - -
Aed1g0489 726 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 177 331 - -
Aed1g0489 726 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 541 597 - -
Aed1g0489 726 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 84 146 - -
Aed1g0489 726 SUPERFAMILY Protein kinase-like (PK-like) 543 618 IPR011009 -
Aed1g0489 726 Pfam Protein tyrosine and serine/threonine kinase 546 626 IPR001245 GO:0004672|GO:0006468
Aed1g0489 726 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 177 331 - -
Aed1g0489 726 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 84 146 - -
Aed1g0489 726 SUPERFAMILY L domain-like 80 400 - -
Aed1g0489 726 Gene3D Ribonuclease Inhibitor 236 303 IPR032675 -
Aed1g0489 726 Gene3D Ribonuclease Inhibitor 38 235 IPR032675 -
Aed1g0489 726 Gene3D Ribonuclease Inhibitor 304 408 IPR032675 -
Aed1g0489 726 Pfam Malectin domain 446 509 IPR021720 -
Aed1g0489 726 Gene3D - 435 516 - -
Aed1g0489 726 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 603 696 - -
Aed1g0489 726 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 541 597 - -
Aed1g0489 726 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 387 446 - -
Aed1g0489 726 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 387 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0489 Aed-Chr1 6579234 6588963 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0489 597 676 Receptor kinase-like Gene Family AT1G53420 44.444 2.33e-13 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed1g0489 PK_Tyr_Ser-Thr 7.6e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0489 - - gmx:100785451 500.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0489 1 6579234 6588963 Aed1g0489 1 6579234 6588963 ECH