Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0485 ATGACTTTCCCTCCACTCTTCCTTCTCTGGTTTCTTGCCTTTTGTTTGATCTCTTCTTTGGCTATGGGAGCTACTCTGCCCGAAGATGAAGATCCATGCAGTGGACAAAGTAATTGGAATTCATCTGTTGAAAATGCTGTCAAATGCAATTGCCACTTTGCCAATGCCACTATCTGCCATGTTGTTAGCATTGTTCTCAAGTCACAAAATCTTACGGGCACACTCCCAAGTGAACTAATGAGATTGCCTTACCTCCAAGTAATTGACCTCTCCCGAAACTACCTCAATGGTACCATCCCTCCACAATGGGGCTCCATGAAACTTGTCAGCATTTTCATTCCTGGAAATCGGCTAACGGGTCCAATTCCTAAAGAATTGGGAAACATCAGTACCCTGATAACTTTGGTCCTAGAGTTCAATCAATTATCTGGAGCACTTCCTCTAGAGCTTGGGAATCTACACCAACTTGAAATACTGCTTCTTACATCTAACTACTTTACGGGAAATTTACCTGCAACATTTTCTAGGCTTACTACACTGAAGAAAGTTCGACTTGGTGACAATCAATTCTCTGGAACTATACCTAGTTTCATCCAGAGCTGGAGAAGTCTCGAGAAATTGGTGATGCAAGGGAGTGGTTTTAGTGGGCCAATTCCTTCTGGAATTTCATTTCTGAAAAATCTCAGTGATTTGAGAATTAGTGACTTGAAAGGACCAGATTCTCAATTTCCCCAACTTATAAACTTGACAAATTTGCAAACACTAGTATTGAGGAGTTGCAATCTGATAGGAATGGTTCCTGAATCTCTTGGAAATTTGACTACTTTACGATCATTAGACTTCAGCTTTAACAAATTAACTGGACAGATTCCAACAACCTTGGGTGACTTAAAGTTAAAGGATTTAAATTTACTATACTTAACAGGAAACCATTTTACTGGACAACTGCCTAATTGGTTAGATAGGCTAAACTACGTGGATCTCTCGTATAACAATTTGACCATTGAAAATCCAGAGAAGTTGACATGTCAACAGGGAAGCATGAACTTGTTTGCATCATCTTTGAATGGAAATCACTTGGGAACAGTTCCATGTTTGGGAGACATTAATTGTCCTAAAAATAGGTACTACTCCCTCCGTATAAATTGTGGTGGGAAGCTTATATCTAATGGATGCATGACATATGAAGATGATTCACAAGAAGCTGGACCAGCAAGATTTCGCCAGAAGACTGGTTCAAATTGGGTACTTAGTAACACCGGTCATTTCTTTGATACTAACCTCTCCTCAGACTACTATACTTGGTCTAATACAACTAAGCTTGCGATGCAAAATGGTGAACTACTGTATATGGATGCACGTGTTTCTGCCCTTTCCCTCACATACTATGCATTTTGTATGGGAAATGGAAACTACACAGTACATCTTCATTTTGCAGAAATTATGTTCTCTGATGATCAAACATTTAGTAGCCTCGGAAGGCGCGTATTTGACATTTATATTCAGAGAGTGTTGGTGCTGAAGGATTTCAATATTGCAAAAGAAGCTGGAGGAGTTGGTAAGGCACTCATAAAAAATTTCACTGCTATTGTGAATACCAGTACCTTAGAGATTCGTTTGCAATGGGCTGGTAAAGGAACAACTGCTATCCCTTTTGCAACAGTTCATGGCCCTCTTATATCAGCTATATCTGTTGATCCAGCAGACTTTATACCACCTGTGGAAAATGGAGGTGGCATAGGTGTGCATTCTATTGTTGCAATTGTAGTTGCAGGGGCACTTGTTATCATCATAGTATTTGGTATATCTTGGTGGGGAGGATGCCTTGGAAAGAAAAATTCATTAGAAAGAGAGTTAAAGGATTTAAACATGCAAATGGGGGTTTTTACTATGCGTCAAATCAAAGTTGCTACAAATAACTTTGATATTTCCAATAAGATTGGAGAAGGAGGCTTCGGTCCTGTCTATAAGGGCATTTTATCAAATGGCATGATAATAGCTGTGAAGATGCTTTCATCTAAGTCAAAGCAAGGAAACCGCGAGTTTATAAATGAGATAGGCTTGATTTCAGCTTTGCAACACCCTTGTCTTGTTAAACTTTATGGTTGCTGTGTTGAGGGAGATCAGTTGTTGCTGGTATACGAATATATGGAAAACAATAGCCTTTCTCATGCTTTATTTGTAACAACATGCTGCTGTCAACCAGGGGCATTGGTGGCACGTTTGATATTGAAAGAGAAAGGTAACCTAATGGAGCTAGTAGATAGAAGATTAGGATCAAATTTCAATAAAGATGAGGTAATGTTGATGATCAAAGTGGCTCTCCTATGCACCAATTTCACTTCAAACCTTAGGCCTACCATGTCATCAGTGCTTAGCATGCTTGAAGGAAGAACTCCAATTCCAGAATTTATTTCAGATCCAAGTGAGAAAATGGATGAAATGAAGTTAAAGGAAATGAGACAATATTACTTTGAAGTAGAAGAAAATGAGAGTAGTGATGAGACACAAGCACAGAGTCATAGTTTATCAATTGATGGGCCATGGACTGCTTCATCTTCATCAGCTGCAGAGTTATATCCTGCTCACACTGATTCTTCTGATTGGGAGAAAAGAAATTAG 2622 0.3917 MTFPPLFLLWFLAFCLISSLAMGATLPEDEDPCSGQSNWNSSVENAVKCNCHFANATICHVVSIVLKSQNLTGTLPSELMRLPYLQVIDLSRNYLNGTIPPQWGSMKLVSIFIPGNRLTGPIPKELGNISTLITLVLEFNQLSGALPLELGNLHQLEILLLTSNYFTGNLPATFSRLTTLKKVRLGDNQFSGTIPSFIQSWRSLEKLVMQGSGFSGPIPSGISFLKNLSDLRISDLKGPDSQFPQLINLTNLQTLVLRSCNLIGMVPESLGNLTTLRSLDFSFNKLTGQIPTTLGDLKLKDLNLLYLTGNHFTGQLPNWLDRLNYVDLSYNNLTIENPEKLTCQQGSMNLFASSLNGNHLGTVPCLGDINCPKNRYYSLRINCGGKLISNGCMTYEDDSQEAGPARFRQKTGSNWVLSNTGHFFDTNLSSDYYTWSNTTKLAMQNGELLYMDARVSALSLTYYAFCMGNGNYTVHLHFAEIMFSDDQTFSSLGRRVFDIYIQRVLVLKDFNIAKEAGGVGKALIKNFTAIVNTSTLEIRLQWAGKGTTAIPFATVHGPLISAISVDPADFIPPVENGGGIGVHSIVAIVVAGALVIIIVFGISWWGGCLGKKNSLERELKDLNMQMGVFTMRQIKVATNNFDISNKIGEGGFGPVYKGILSNGMIIAVKMLSSKSKQGNREFINEIGLISALQHPCLVKLYGCCVEGDQLLLVYEYMENNSLSHALFVTTCCCQPGALVARLILKEKGNLMELVDRRLGSNFNKDEVMLMIKVALLCTNFTSNLRPTMSSVLSMLEGRTPIPEFISDPSEKMDEMKLKEMRQYYFEVEENESSDETQAQSHSLSIDGPWTASSSSAAELYPAHTDSSDWEKRN 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0485 873 Gene3D - 375 567 - -
Aed1g0485 873 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 51 262 - -
Aed1g0485 873 Gene3D Ribonuclease Inhibitor 165 237 IPR032675 -
Aed1g0485 873 Pfam Malectin domain 378 563 IPR021720 -
Aed1g0485 873 SUPERFAMILY L domain-like 33 380 - -
Aed1g0485 873 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 746 841 - -
Aed1g0485 873 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 262 324 - -
Aed1g0485 873 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 356 731 - -
Aed1g0485 873 Gene3D Ribonuclease Inhibitor 238 356 IPR032675 -
Aed1g0485 873 Gene3D Ribonuclease Inhibitor 24 164 IPR032675 -
Aed1g0485 873 Gene3D Transferase(Phosphotransferase) domain 1 726 811 - -
Aed1g0485 873 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 51 262 - -
Aed1g0485 873 SUPERFAMILY Protein kinase-like (PK-like) 623 730 IPR011009 -
Aed1g0485 873 ProSiteProfiles Protein kinase domain profile. 641 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g0485 873 Pfam Protein tyrosine and serine/threonine kinase 643 726 IPR001245 GO:0004672|GO:0006468
Aed1g0485 873 Gene3D Phosphorylase Kinase; domain 1 609 716 - -
Aed1g0485 873 MobiDBLite consensus disorder prediction 836 861 - -
Aed1g0485 873 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 746 841 - -
Aed1g0485 873 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 262 324 - -
Aed1g0485 873 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 356 731 - -
Aed1g0485 873 MobiDBLite consensus disorder prediction 828 873 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0485 Aed-Chr1 6541050 6550098 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0485 743 824 Receptor kinase-like Gene Family AT1G53420 41.860 3.13e-13 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed1g0485 Malectin 2.5e-40 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0485 - - gmx:100786496 1109.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0485 1 6541050 6550098 Aed1g0485 1 6541050 6550098 ECH