Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0481 ATGCAATTCCTAACGTGTCATAATGAAGCAGACTTTACACCCAAAGAGGAAAATGAAGATGGCATGCCTGTGCAGTTTATTGTTGCAATTGTAGTTACTGGAGCACTTGTTATCATCGTAATATTTGGAATAGCTTGGTGGAGAGGATGTCTAAGAAGGAAAGGTTCATTGGAAAGAGAGCTAAGGGGTGTAGATCTGCAAACTGGCTTATTTAGCTTACGACAAATCAGAGCTGCAACTAGCAACTTTGATATTGCATTCAAGATTGGAGAAGGAGGCTTTGGTCCTGTGTACAAGGGTGTTCTCTCAGATGGCACAGTAATAGCAGTTAAACAACTTTCTTCCAAATCAAAGCAAGGGAATCGTGAGTTTATAAATGAGATTGGCATGATTTCTGCTTTGCAACACCCTTGCCTAGTTAAGCTCTATGGTTGTTGTATGGAAGGAGATCAATTGATGTTGGTGCGTCTCTTGAAAGAACAAGGCAATCTAATGGACCTAGTTGATGAGAGGTTGGGTAAAGATTTCAAAAAAGATGAAGTAGTGGTGATGATCAATGTGGCTCTACTATGCACACAAGTTTCTTCAATGCATAGACCTACCATGGCTTCAGTGGTGTGCATGCTTGAAGGCAAAACTGATGTTCAAGAAGTGGTGTCAGACACAAGCCAGGTATTGGATGGAATGAAGTTAGAGATGATCCAACAATACTACCAACTAAGAGAAAAAAATAAGACACGTGAGACTTCTCAAGAAGAAAGCATCTCAATGGCTGAAACTTCAGCATTTATGTCTGACACAGATCTATATTCTGTCAACATGGATTCTTCTTACCAGGAGAAAAATTTTGACACAGACTAA 861 0.3984 MQFLTCHNEADFTPKEENEDGMPVQFIVAIVVTGALVIIVIFGIAWWRGCLRRKGSLERELRGVDLQTGLFSLRQIRAATSNFDIAFKIGEGGFGPVYKGVLSDGTVIAVKQLSSKSKQGNREFINEIGMISALQHPCLVKLYGCCMEGDQLMLVRLLKEQGNLMDLVDERLGKDFKKDEVVVMINVALLCTQVSSMHRPTMASVVCMLEGKTDVQEVVSDTSQVLDGMKLEMIQQYYQLREKNKTRETSQEESISMAETSAFMSDTDLYSVNMDSSYQEKNFDTD 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0481 286 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 161 254 - -
Aed1g0481 286 Gene3D Phosphorylase Kinase; domain 1 51 156 - -
Aed1g0481 286 SMART tyrkin_6 83 283 IPR020635 GO:0004713|GO:0006468
Aed1g0481 286 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 44 155 - -
Aed1g0481 286 Pfam Protein tyrosine and serine/threonine kinase 88 229 IPR001245 GO:0004672|GO:0006468
Aed1g0481 286 ProSiteProfiles Protein kinase domain profile. 83 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g0481 286 SUPERFAMILY Protein kinase-like (PK-like) 67 177 IPR011009 -
Aed1g0481 286 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 161 254 - -
Aed1g0481 286 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 44 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0481 Aed-Chr1 6529048 6531515 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0481 157 246 Receptor kinase-like Gene Family AT1G07650 40.000 7.17e-17 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed1g0481 PK_Tyr_Ser-Thr 1.2e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0481 - - gmx:100786496 277.715