Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0471 ATGGATTCCGTATTAACTATACTTTCCCTCTTATTGACATGCACCATTATACACTTTCTTCTTTCAAACAAAACAATAATTAGAAAACGAAGAAACCACAAGCTTCCACCAGGGCCTTCTCTTCTTGCCCTAGTGGTAAACCTGGTTGAACTTGGCAAAAAGCCACAACAAACATTGGCAAAACTTGCAAACCTTCATGGCCCCATAATGCATTTGAAGCTAGGCCAACTAACCACCGTAGTTATCTCTTCACCAAACATAGCCAAAGAGGTTTTCCAAACCCATGACGTATTACTCTCAAACCGAACCATTCCACATGCCACAACGGTTCACAACCACAACCACTATAGCTTACCCTTTCTCCCCATTTCACCCCTTTGGAGAGACCTTAGGAGAATATGCAACAACCAATTGTTCTCTCACAAGTCCCTTGATGCAAGCCAAAACCTTAGACACAAAAAAATCCAAGAACTTCTCAATGATGTGCATAGAAGTAGCCTTAGTGGTGAAGCTGTGGATATTGGAACTTTGGCTTTTAGGACTTTGATTAATTTTTTGTCAAACACTTTTTTCTCTTTGGATTTTGTTAACTCTGTAGGTGAAATTGAAGAGTACAAGGGTATAGTGGAGAATCTTGTGAGGGTAATTGCAACGCCAAACTTGGTGGATTTTTTCCCTTTGTTGAAGATGGTTGATCCACAAGGCATTAGAAGGCGATCATCTACTTATGATCTAATTGTGGCGGGAAGTGATTCAACTTCCTTCGCAATAAAATGGGCAATGGCTGAACTAATCAATAACCCAGATGCAATGACAAAAGTAAAAAGGGAACTTGAGCAAACCATTGGAATAAGCAATAATAATATTGCTGATGTTGATGAGGAATATTCCGACATTACAAGACTCCCATACTTGCATGCAATAATAAAAGAGACATTGCGAATGCACCCATCTGCACCACTTTTGCTACCTAGAAAAGCCAAGATAGATGTTGAGATCAATGGCTACACCATCCCAAAGGGTGCACAAATAGTGATTAATGAATGGGCCATTGGAAGGGACCCTAGCATATGGGAAAACCCTAATTTGTTTTCGCCTGAGAGGTTTTTGGGGTCAGAGATTGATGTCAAAGGTCGACATTCTCAACTCACACCTTTTGGTGCTGGGAGAAGAATATGCCCTGGCTTGCCACTAGCCATGAGGATGTTGCATTTGATGTTGGGGTCGTTGATCATTGCTTTTGATTGGGAATTTGAAAATGGTGTGAAGCCTGATATTGACATGGGTCAACCCTTGCGGGCTGTTCCATTTAGAATTAACAAATAA 1326 0.408 MDSVLTILSLLLTCTIIHFLLSNKTIIRKRRNHKLPPGPSLLALVVNLVELGKKPQQTLAKLANLHGPIMHLKLGQLTTVVISSPNIAKEVFQTHDVLLSNRTIPHATTVHNHNHYSLPFLPISPLWRDLRRICNNQLFSHKSLDASQNLRHKKIQELLNDVHRSSLSGEAVDIGTLAFRTLINFLSNTFFSLDFVNSVGEIEEYKGIVENLVRVIATPNLVDFFPLLKMVDPQGIRRRSSTYDLIVAGSDSTSFAIKWAMAELINNPDAMTKVKRELEQTIGISNNNIADVDEEYSDITRLPYLHAIIKETLRMHPSAPLLLPRKAKIDVEINGYTIPKGAQIVINEWAIGRDPSIWENPNLFSPERFLGSEIDVKGRHSQLTPFGAGRRICPGLPLAMRMLHLMLGSLIIAFDWEFENGVKPDIDMGQPLRAVPFRINK 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0471 441 PRINTS P450 superfamily signature 248 265 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0471 441 PRINTS P450 superfamily signature 307 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0471 441 PRINTS P450 superfamily signature 384 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0471 441 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0471 441 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 4 242 - -
Aed1g0471 441 Coils Coil 275 295 - -
Aed1g0471 441 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 386 395 IPR017972 GO:0005506|GO:0016705
Aed1g0471 441 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 242 - -
Aed1g0471 441 Pfam Cytochrome P450 36 232 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0471 441 Pfam Cytochrome P450 242 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0471 441 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 243 429 - -
Aed1g0471 441 Gene3D Cytochrome P450 241 441 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0471 441 PRINTS E-class P450 group I signature 383 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0471 441 PRINTS E-class P450 group I signature 393 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0471 441 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0471 441 PRINTS E-class P450 group I signature 306 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0471 441 PRINTS E-class P450 group I signature 347 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0471 441 PANTHER CYTOCHROME P450 FAMILY PROTEIN 243 429 - -
Aed1g0471 441 Gene3D Cytochrome P450 27 240 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0471 441 SUPERFAMILY Cytochrome P450 36 429 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0471 Aed-Chr1 6465897 6467961 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0471 1 440 Cytochrome P450 AT2G45550 38.095 1.21e-114 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0471 - - gmx:100792017 681.019