Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0470 ATGGATTTTTTAATTAGTATACTTCTCCTCTTATTGGCATGCACCACTATACACATTCTCTCAAACGAAGTAACTACAAAACGAAACCACAAGCTCCCACCAGGGCCTTCTCTTCTAACCCTAGTGACAAACCTAGTTGAACTTGGCAAAAAGCCACAACAAACATTGGCCAAACTTGCAAACCTTAACGGTTCCATAATGTCTTTCAAGCTAGGGCAACTAACCACCATAGTCATCTCTTCACCCGACATAGCCAAATCGGTTCTCCAAACCCATGACTTGCTATTCTCAAATCGAACCATTCCACATGCCACAACGGTTCACAACCACAACCACTATAGCTTACCCTTTCTCCCCGTTTCACCTCTTTGGAGAGACCTTAGGAGAATATGCAACAACCAATTGTTCTCACACAAGTCCCTTGATGCAAGCCAAAACCTTAGACGCAAAAAAATCCAAGAGCTTCTCAATGATGTGCATAGGAGTAGCCTTAGTGGTGAAAATGTAGATATTGGAACTTTGGCTTTTAGGGCTTCGATTAATTTTTTGTCAAACTTGTTTTTCTCTTTGGATTTTGTTAACTCTTTAGGTGAAGCTCAAGAGTACATGGTTATAGTGGAGAATCTTGGTAGAGCAATTGCAACGCCAAATTTGGAGGATTTTTTCCCTTTGTTGAAGATGGTTGATCCACAAGGCATTAGAAGACGCACTTCTACTTATGTTTCCAAGTTGTTTGCTATTTTTGACCGTTTGATTGAGAAAAGATTGGAGTTTGGAGATGGCAGAAATAGTGAAGACATGTTAGACACCTTGCTCAACATTTCTCATGAAGATGGCCAAAAGATGGATCACAACAAGATTAAGCATTTGTTCCTCGATCTAATTGTTGCTGGAACCGATACAACATCCTACACAATGGAATGGGCAATGGCTGAGCTAATAAAAAACCCTAACATAATGTCAAAAGCCAAAAGAGAGCTTGAGCAAACCATAGGAATAGGAAACCCTATTGAGGAATCAGACATTGCAACATTAAAACTCCCTTATTTGAGTGCAATAATAAAAGAGACATTGCGAATGCACCCAGGTGCACCACTTTTGCTACCTAGAAAAGCCAACATAGATGTTGAGATCAATGGCTACACTATTCCAAAAGGTGCGCAAATAGTGATTAATGAATGGGCCATTGGAAGGAACGAAAGTATATGGGAAAATCCTAATTTGTTTTCACCTGAGAGGTTTTTGGGGTCAGAGATTGATGTCAAAGGTCGACATTCTCAACTCACACCTTTTGGTGCTGGGAGAAGAATTTGCCCTGGCTTGCCACTAGCTATGAAGATGTTGCATTTAATGTTGGGGTCGTTGATCAATGCTTTTGATTGGGAGTTTGAAAATGGTGTGAACCCTGGTTTCGACATGGGTCAACCCTTGCGAGCTGTTCCATTTAGAATAAACAAATAA 1461 0.4045 MDFLISILLLLLACTTIHILSNEVTTKRNHKLPPGPSLLTLVTNLVELGKKPQQTLAKLANLNGSIMSFKLGQLTTIVISSPDIAKSVLQTHDLLFSNRTIPHATTVHNHNHYSLPFLPVSPLWRDLRRICNNQLFSHKSLDASQNLRRKKIQELLNDVHRSSLSGENVDIGTLAFRASINFLSNLFFSLDFVNSLGEAQEYMVIVENLGRAIATPNLEDFFPLLKMVDPQGIRRRTSTYVSKLFAIFDRLIEKRLEFGDGRNSEDMLDTLLNISHEDGQKMDHNKIKHLFLDLIVAGTDTTSYTMEWAMAELIKNPNIMSKAKRELEQTIGIGNPIEESDIATLKLPYLSAIIKETLRMHPGAPLLLPRKANIDVEINGYTIPKGAQIVINEWAIGRNESIWENPNLFSPERFLGSEIDVKGRHSQLTPFGAGRRICPGLPLAMKMLHLMLGSLINAFDWEFENGVNPGFDMGQPLRAVPFRINK 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0470 486 Pfam Cytochrome P450 33 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0470 486 Gene3D Cytochrome P450 19 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0470 486 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0470 486 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0470 486 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0470 486 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0470 486 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0470 486 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0470 486 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0470 486 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 484 - -
Aed1g0470 486 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 484 - -
Aed1g0470 486 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Aed1g0470 486 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0470 486 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0470 486 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0470 486 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0470 486 SUPERFAMILY Cytochrome P450 33 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0470 Aed-Chr1 6459182 6461354 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0470 1 467 Cytochrome P450 AT2G45550 41.996 2.02e-134 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0470 - - gmx:100792017 820.076